PLAZA 3.0 Dicots : Binding Sites

Binding sites with simlar sequences

Binding site: Matrix_410
Name: TOE2
Description: Not Available

Positional Weight Matrix

Minimum similarity percentage

Binding site	Name	Description	Similarity
Matrix_402	TOE1	Not Available	89.99%
Matrix_327	ARR11	Not Available	69.32%
Matrix_479	TOE1	Not Available	68.93%
Matrix_430	TOE2	Not Available	68.23%
Matrix_193	RAV1	Not Available	64.79%
Matrix_265	NGA3	Not Available	64.79%
Matrix_454	AT1G77200; ATERF38; AT4G16750; AT5G52020	Not Available	63.45%
Matrix_92	AT1G33760	Not Available	61.89%
Matrix_237	MYB55	Not Available	61.84%
Matrix_321	HRD	Not Available	60.87%
Matrix_61	ATCBF3	Not Available	60.13%
Matrix_151	ASIL1	Not Available	59.67%
Matrix_244	DREB2C	Not Available	59.62%
Matrix_391	AHL20	Not Available	59.50%
Matrix_249	WRKY11	Not Available	59.50%
Matrix_377	AT1G75490; DREB2C; AT2G40350; AT5G18450	Not Available	59.48%
Matrix_452	MYB46	Not Available	59.25%
Matrix_399	TGA1	Not Available	59.13%
Matrix_268	EMB2749; VND5; SMB; VND1; ANAC076; NAC101; ANAC105	Not Available	59.13%
Matrix_409	DEAR3	Not Available	59.10%
Matrix_475	AT5G64220	Not Available	58.98%
Matrix_38	SPL14	Not Available	58.09%
Matrix_171	LBD3; LBD4	Not Available	58.00%
Matrix_395	AT1G19210; ORA47; AT4G31060; AT5G21960	Not Available	57.86%
Matrix_56	BZIP17; BZIP28; BZIP49	Not Available	57.72%
Motif_403	WINPSTPIIIK	Binding site of wound-inducible nuclear protein from wounded tomato leaves; Found in the promoter region of a protease inhibitor IIK gene from potato	57.34%
Matrix_394	DREB_U	Not Available	57.29%
Matrix_166	TGA4	Not Available	57.16%
Matrix_185	AHL25	Not Available	57.12%
Matrix_141	AT3G25990	Not Available	57.10%
Matrix_500	WRKY43	Not Available	56.94%
Matrix_59	AT4G00238; AT4G00250	Not Available	56.64%
Matrix_385	DEAR4	Not Available	56.39%
Matrix_286	GATA7	Not Available	56.32%
Matrix_311	TGA1	Not Available	56.18%
Matrix_326	AT5G07310; Rap2.6L; AT5G61890	Not Available	56.18%
Matrix_196	TCP20; AT5G41030	Not Available	56.02%
Matrix_355	ERF10; ERF11	Not Available	55.91%
Matrix_261	ATERF-1	Not Available	55.89%
Matrix_374	AT5G07580; AT5G61590	Not Available	55.83%
Matrix_12	EIN3; EIL2	Not Available	55.56%
Matrix_50	ATERF14; AT5G43410	Not Available	55.45%
Matrix_314	WRKY65; WRKY14; WRKY35; WRKY69; WRKY16; ATWRKY52	Not Available	55.44%
Matrix_176	MYB98	Not Available	55.29%
Matrix_57	WIN1; SHN3; SHN2	Not Available	55.26%
Matrix_168	AHL25	Not Available	55.23%
Matrix_447	RVE1	Not Available	55.22%
Matrix_434	ARR11	Not Available	55.15%
Matrix_478	AT1G01250	Not Available	55.08%
Motif_351	GARE1OSREP1	Gibberellin-responsive element (GARE) found in the promoter region of a cystein proteinase (REP-1) gene in rice	54.98%
Motif_288	NONAMERMOTIFTAH3H4	Nonamer motif found in promoter of wheat histone genes H3 and H4	54.95%
Matrix_230	ARR11	Not Available	54.93%
Matrix_113	ABI5	Not Available	54.90%
Matrix_226	GATA1	Not Available	54.88%
Matrix_362	DEAR3	Not Available	54.74%
Motif_4	NAP	An abscisic acid-AtNAP transcription factor-SAG113 protein phosphatase 2C regulatory chain for controlling dehydration in senescing Arabidopsis leaves	54.58%
Matrix_99	DOF4.7	Not Available	54.56%
Motif_101	MYB61	AtMYB61, an R2R3-MYB transcription factor, functions as a pleiotropic regulator via a small gene network	54.56%
Matrix_180	SPL1	Not Available	54.53%
Matrix_128	TGA2	Not Available	54.49%
Matrix_316	WRKY15; WRKY39; WRKY7; WRKY74	Not Available	54.48%
Matrix_157	LHY; RVE2	Not Available	54.36%
Matrix_91	CRF3	Not Available	54.34%
Matrix_259	AT1G50680; AT1G51120	Not Available	54.29%
Matrix_332	SPT; ALC	Not Available	54.23%
Matrix_88	AHL12	Not Available	54.11%
Matrix_280	TCP24; TCP1; BRC2; ATTCP18	Not Available	54.05%
Motif_138	RAP2.2	Transcription factor RAP2.2 and its interacting partner SINAT2: stable elements in the carotenogenesis of Arabidopsis leaves	54.04%
Motif_665	ACEATCHS	ACEAtCHS (ACGT containing element) found in the LRU (light-responsive unit) in Arabidopsis chalcone synthase (CHS) gene promoter; Required for UV-B and UV-1/blue light responsiveness; Transcriptional repression by AtMYB4 controls production of UV-protecting sun screens in Arabidopsis; AtMYB4 mutant shows enhanced levels of sinapate ester in leaves and tolerance of UV-B irradiation; AtMYB4 expression is downregulated by exposure to UV-B light; Identification of UV/blue light-response elements in the Arabidopsis thaliana chalcone synthase promoter using a homologous protoplast transient expression system	54.01%
Matrix_54	AHL20	Not Available	54.01%
Matrix_396	AP3	Not Available	53.98%
Matrix_73	DEAR3; RAP2.9; RAP2.10	Not Available	53.95%
Motif_666	MYB binding site promoter	A flower-specific Myb protein activates transcription of phenylpropanoid biosynthetic genes	53.93%
Motif_358	UP2ATMSD	Up2 motif found in 193 of the 1184 up-regulated genes after main stem decapitation in Arabidopsis	53.90%
Motif_243	TELOBOXATEEF1AA1	telo-box (telomere motif) found in the Arabidopsis (A.t.) eEF1AA1 gene promoter; Conserved in all known plant eEF1A gene promoters; Found in the 5' region of numerous genes encoding components of the translational apparatus; Required for the activation of expression in root primordia; Acts co-operatively with tef-box; Binding site of AtPur alpha-1; Plant interstitial telomere mitifs participate in the control of gene expression in root meristems	53.89%
Motif_673	Bellringer/replumless/pennywise BS2 IN AG	Repression of AGAMOUS by BELLRINGER in Floral and Inflorescence Meristems	53.86%
Matrix_521	AHL20	Not Available	53.81%
Matrix_142	ZFP8	Not Available	53.75%
Matrix_242	AT2G25820; AT3G16280; AT4G32800; TINY2; tny	Not Available	53.68%
Motif_127	SBOXATRBCS	S-box conserved in several rbcS promoters in Arabidopsis; ABI4 binding site; Important for the sugar and ABA responsiveness of CMA5	53.65%
Matrix_442	AT5G62260	Not Available	53.54%
Matrix_277	RAP2.6	Not Available	53.39%
Matrix_416	ASL5	Not Available	53.38%
Matrix_116	ANAC55	Not Available	53.29%
Matrix_60	AT1G01260; AT5G57150	Not Available	53.28%
Matrix_80	BIM1	Not Available	53.26%
Matrix_477	RAV1	Not Available	53.20%
Matrix_467	RAV1	Not Available	53.20%
Matrix_34	RAV1_2	RAV1, a novel DNA-binding protein, binds to bipartite recognition sequence through two distinct DNA-binding domains uniquely found in higher plants	53.20%
Matrix_114	EPR1; AT3G10113	Not Available	53.18%
Matrix_432	AT1G77920	Not Available	53.15%
Matrix_195	GATA2; GATA4	Not Available	53.08%
Matrix_350	ARR14	Not Available	52.99%
Motif_58	LREBOXIPCCHS1	BoxI; Light responsive element (LRE) found in the parsley CHS-1 (chalcone synthase-1) gene promoter; Required for light responsiveness; nuclear protein binding site; MRECHS (MRE=Myb Recognition Element)Recognition site of MYB305 and a novel factor PcMYB1 (Myb1 from P. crispum); PcMYB1 contains only one MYB repeat	52.96%
Matrix_129	ABF1	Not Available	52.82%
Matrix_52	ZAT18	Not Available	52.81%
Matrix_317	AT1G06070; AT2G31370; AT2G40620	Not Available	52.77%
Matrix_287	ERF2	Not Available	52.64%
Matrix_181	Dof5.7	Not Available	52.53%
Matrix_233	MYC3	Not Available	52.50%
Matrix_493	AT1G22985; AT1G71130	Not Available	52.48%
Matrix_519	ATDOF2.4	Not Available	52.39%
Matrix_451	STY1	Not Available	52.34%
Matrix_150	UNE10; PIF7	Not Available	52.23%
Motif_18	5659BOXLELAT5659	56/59 box; A sequence motif shared between the tomato LAT(Late Anther Tomato)56 and LAT59 promoters; Found in -103 to -94 in LAT56 and in -114 to -105 in LAT59; Involved in modulating the activity of the LAT gene promoters in pollen	52.16%
Motif_167	SBP-box promoter motif	Molecular characterisation of the Arabidopsis SBP-box genes	52.15%
Matrix_101	ERF5	Not Available	52.13%
Matrix_308	INO	Not Available	52.01%
Matrix_408	GATA12	Not Available	51.99%
Matrix_320	MYC4	Not Available	51.95%
Matrix_419	TGA9; PAN; TGA6; bZIP65	Not Available	51.89%
Matrix_357	WRKY61; WRKY6; WRKY9; WRKY36; WRKY47; WRKY42; WRKY31; WRKY72	Not Available	51.72%
Matrix_241	HB-1; AT5G44180	Not Available	51.71%
Matrix_177	ADOF2	Not Available	51.71%
Motif_590	MYB3 binding site motif	Expression profile matrix of Arabidopsis transcription factor genes suggests their putative functions in response to environmental stresses	51.69%
Matrix_131	HDG12; EDT1; GL2; HDG8	Not Available	51.65%
Matrix_273	ANAC55	Not Available	51.61%
Matrix_78	AT3G45610	Not Available	51.60%
Matrix_10	STY1	Not Available	51.57%
Matrix_271	AT3G16350	Not Available	51.53%
Matrix_365	AT1G10120; AT1G25330; CIB5; AT1G68920; AT3G23690; CIB1	Not Available	51.43%
Matrix_46	AT4G21895	Not Available	51.43%
Matrix_32	AHL25	Not Available	51.41%
Matrix_322	NST3; ANAC015; BRN2	Not Available	51.41%
Matrix_145	GBF4; AT5G44080	Not Available	51.37%
Matrix_411	DOF5.6	Not Available	51.23%
Matrix_433	ATERF1	Not Available	51.15%
Matrix_471	KAN4	Not Available	50.97%
Matrix_437	MYC2	Not Available	50.94%
Motif_618	MYB1AT	MYB recognition site found in the promoters of the dehydration-responsive gene rd22 and many other genes in Arabidopsis	50.93%
Matrix_323	BIM3	Not Available	50.89%
Motif_233	DRE1COREZMRAB17	DRE1 core found in maize rab17 gene promoter; DRE1 was protected, in in vivo footprinting, by a protein in embryos specifically, but in leaves, was protected when was treated with ABA and drought; rab17 is expressed during late embryogenesis, and is induced by ABA	50.88%
Matrix_64	PIF5	Not Available	50.81%
Matrix_446	LBD16	Not Available	50.81%
Motif_256	RHE_element	Functional Conservation of a Root Hair Cell-Specific cis-Element in Angiosperms with Different Root Hair Distribution Patterns	50.79%
Matrix_33	SPL11; SPL10; SPL2	Not Available	50.76%
Matrix_120	BEE2	Not Available	50.75%
Motif_574	MYB2 binding site motif	MYB transcription factors in plants	50.71%
Motif_349	QARBNEXTA	QAR (quantitative activator region) in promoter region of Brassica napus extA extensin gene	50.58%
Matrix_81	YAB1	Not Available	50.58%
Motif_616	BZIP12; ABI5	The homologous ABI5 and EEL transcription factors function antagonistically to fine-tune gene expression during late embryogenesis	50.56%
Matrix_224	ERF1	Not Available	50.53%
Motif_550	MRE motif in CHS	MREAtCHS (MRE = Myb Recognition Element) found in the LRU (light-responsive unit) in Arabidopsis chalcone synthase (CHS) gene promoter; Required for UV-B and UV-A/blue light responsiveness;Identification of UV/blue light-response elements in the Arabidopsis thaliana chalcone synthase promoter using a homologous protoplast transient expression system	50.53%
Matrix_158	AT1G03040; LRL1; UNE12; LRL2; LRL3	Not Available	50.51%
Matrix_167	ZAT6	Not Available	50.49%
Matrix_212	ATHB-12	Not Available	50.46%
Matrix_400	MYB46	MYB46 and MYB83 bind to the SMRE sites and directly activate a suite of transcription factors and secondary wall biosynthetic genes	50.45%
Matrix_486	MYB83	MYB46 and MYB83 bind to the SMRE sites and directly activate a suite of transcription factors and secondary wall biosynthetic genes	50.45%
Motif_254	MYB46; MYB83	MYB46 and MYB83 bind to the SMRE sites and directly activate a suite of transcription factors and secondary wall biosynthetic genes	50.45%
Matrix_125	AHL12	Not Available	50.43%
Matrix_283	GATA15; GATA17; AT4G16141; GATA22; GATA23; GATA16; GNC	Not Available	50.42%
Motif_166	RAP2.2	Transcription factor RAP2.2 and its interacting partner SINAT2: stable elements in the carotenogenesis of Arabidopsis leaves	50.42%
Matrix_489	RAV1	Not Available	50.40%
Matrix_520	ARR14	Not Available	50.33%
Motif_520	AMYBOX1	amylase box; Conserved sequence found in 5'-upstream region of alpha-amylase gene of rice, wheat, barley	50.30%
Motif_19	AAGACGTAGATACL12	Sequence found in Arabidopsis acyl carrier protein (ACP), Acl1.2, gene promoter; Contains bZIP core motif (ACGT)	50.29%
Matrix_383	CCA1	Not Available	50.24%
Motif_88	MYB2AT	Binding site for ATMYB2, an Arabidopsis MYB homolog; ATMYB2 binds oligonucleotides that contained a consensus MYB recognition sequence (TAACTG), such as is in the SV40 enhancer and the maize bronze-1 promoter; ATMYB2 is involved in regulation of genes that are responsive to water stress in Arabidopsis	50.23%
Matrix_139	OBF5	Not Available	50.15%
Matrix_93	YAB5	Not Available	50.15%
Matrix_109	GBF3	Not Available	50.15%
Matrix_415	WRKY27	Not Available	50.14%
Matrix_111	ABF3	Not Available	50.12%
Motif_200	GBOXLERBCS	G box; Conserved sequence upstream of light-regulated genes; Sequence found in the promoter region of rbcS of tomato and Arabidopsis; Binding with GBF	50.08%
Matrix_135	ABI3	Not Available	50.08%
Motif_92	ABREATRD22	ABRE (ABA responsive element) in Arabidopsis dehydration-responsive gene rd22	50.06%