PLAZA 3.0 Dicots : Binding Sites

Binding sites with simlar sequences

Binding site: Matrix_364
Name: FLC
Description: Not Available

Positional Weight Matrix

Minimum similarity percentage

Binding site	Name	Description	Similarity
Matrix_132	SOC1	Not Available	66.42%
Matrix_149	PI	Not Available	62.12%
Motif_449	AGL25; SVP	FLOWERING LOCUS C (FLC) regulates development pathways throughout the life cycle of Arabidopsis. Genome-wide identification of SOC1 and SVP targets during the floral transition in Arabidopsis	61.88%
Motif_44	AGL25	FLOWERING LOCUS C (FLC) regulates development pathways throughout the life cycle of Arabidopsis	60.26%
Matrix_89	SOC1	Genome-wide identification of SOC1 and SVP targets during the floral transition in Arabidopsis	59.82%
Matrix_74	LFY	Not Available	59.79%
Matrix_25	AP3	Not Available	59.26%
Matrix_184	AGL15	Not Available	57.69%
Matrix_51	LFY	Not Available	57.45%
Matrix_375	AtSPL8	Not Available	57.43%
Matrix_213	ATHB22	Not Available	57.15%
Matrix_523	FUSCA3	Not Available	56.91%
Matrix_72	CDF2	Not Available	56.88%
Matrix_124	AtHB23; ATHB13; ATHB20; ATHB5	Not Available	56.61%
Matrix_205	AGL15	Not Available	56.58%
Motif_45	AGL25; SOC1	FLOWERING LOCUS C (FLC) regulates development pathways throughout the life cycle of Arabidopsis;Genome-wide identification of SOC1 and SVP targets during the floral transition in Arabidopsis	56.36%
Matrix_407	AP1	Not Available	56.29%
Matrix_208	AP1	Not Available	56.25%
Matrix_353	HAT5	Not Available	56.06%
Matrix_264	ATAREB1	Not Available	55.79%
Motif_664	C1GMAUX28	C1; DNase I protected sequence found in the soybean auxin responsive gene, Aux28, promoter; Located between -463 and -448; A/T-rich sequence	55.53%
Matrix_497	AP3	Not Available	55.52%
Matrix_136	SEP3	Not Available	55.49%
Motif_551	BOX1PVCHS15	Box 1 of bean chs15 promoter; one of SBF-1 binding sites in chs15 promoter; Located at -318 to -305; Involved in organ-specific expression in plant development; Functions as a transcriptional silencer in electroporated protoplasts derived from undifferentiated suspension-cultured soybean cells; Resemble the binding site for the GT-1 factor in light-responsive elements	55.35%
Matrix_412	GL1	Not Available	54.37%
Matrix_501	DAG2	Not Available	54.24%
Matrix_403	BZR1	Not Available	54.21%
Matrix_359	FLC	Not Available	54.01%
Matrix_414	AGL15	Not Available	53.88%
Matrix_227	AT1G64620	Not Available	53.86%
Matrix_13	HAT5	Not Available	53.05%
Matrix_499	ARR18	Not Available	52.70%
Matrix_443	AGL15	Not Available	52.28%
Matrix_391	AHL20	Not Available	52.24%
Matrix_383	CCA1	Not Available	52.24%
Matrix_304	AtSPL3	Functional dissection of the plant-specific SBP-domain: overlap of the DNA-binding and nuclear localization domains	52.15%
Motif_76	SURE1STPAT21	Sucrose Responsive Element (SURE); A motif conserved among genes regulated by sucrose; See also SURE2STPAT21; Found between -184 and -156 bp in the patatin (a major tuber protein) gene promoter of potato	51.68%
Motif_151	CCA1 motif2 BS in CAB1	A myb-related transcription factor is involved in the phytochrome regulation of an Arabidopsis Lhcb gene	51.61%
Matrix_107	AtSPL3	Not Available	51.49%
Matrix_160	RVE1	Not Available	51.49%
Matrix_498	AT2G28710; AT3G46070; AT3G46080; ZAT7	Not Available	51.40%
Matrix_255	cdf3	Not Available	51.39%
Matrix_131	HDG12; EDT1; GL2; HDG8	Not Available	51.38%
Matrix_181	Dof5.7	Not Available	51.37%
Matrix_54	AHL20	Not Available	51.29%
Motif_613	SB3NPABC1	Sclareol box3 (SB3) found at -216 of a plasma membrane ATP binding cassette (ABC) transporter gene (NpABC1) in N. plumbaginifolia; Mutation in SB3 completely abolished sclareolide-mediated expression	51.12%
Matrix_352	LEC2	Not Available	51.06%
Matrix_34	RAV1_2	RAV1, a novel DNA-binding protein, binds to bipartite recognition sequence through two distinct DNA-binding domains uniquely found in higher plants	50.98%
Matrix_467	RAV1	Not Available	50.98%
Matrix_477	RAV1	Not Available	50.98%
Matrix_30	AtSPL8	Functional dissection of the plant-specific SBP-domain: overlap of the DNA-binding and nuclear localization domains	50.80%
Matrix_18	AP3	Not Available	50.72%
Matrix_236	CCA1	Not Available	50.58%
Matrix_438	AtbZIP63	Not Available	50.50%
Motif_646	AACAOSGLUB1	AACA motif found in GluB-1 gene in rice; Required for endosperm-specific expression; Highly conserved in the 5'-flanking region of glutelin genes	50.45%
Matrix_32	AHL25	Not Available	50.26%
Matrix_357	WRKY61; WRKY6; WRKY9; WRKY36; WRKY47; WRKY42; WRKY31; WRKY72	Not Available	50.16%
Matrix_81	YAB1	Not Available	50.06%