Matrix_194 | HYH; HY5 | Not Available | | 93.51% |
Matrix_443 | AGL15 | Not Available | | 80.39% |
Matrix_214 | AP1 | Not Available | | 79.93% |
Matrix_403 | BZR1 | Not Available | | 75.00% |
Matrix_359 | FLC | Not Available | | 74.94% |
Matrix_466 | PRR5 | Not Available | | 74.70% |
Matrix_345 | POC1 | Not Available | | 74.52% |
Matrix_118 | PIF3_2 | Direct targeting of light signals to a promoter element-bound transcription factor | | 74.52% |
Matrix_191 | PIF5 | Phytochrome interacting factors 4 and 5 control seedling growth in changing light conditions by directly controlling auxin signaling | | 74.10% |
Matrix_264 | ATAREB1 | Not Available | | 71.44% |
Matrix_77 | PRR5 | Not Available | | 70.00% |
Matrix_24 | POC1 | Not Available | | 69.21% |
Matrix_15 | PIF3_1 | Direct targeting of light signals to a promoter element-bound transcription factor | | 69.21% |
Matrix_49 | FHY3/FAR1 | Not Available | | 68.97% |
Matrix_369 | AT2G18300 | Not Available | | 68.57% |
Matrix_305 | PIF4 | Interaction between BZR1 and PIF4 integrates brassinosteroid and environmental responses | | 68.19% |
Matrix_55 | PIF3 | Not Available | | 67.89% |
Matrix_104 | PI | Not Available | | 67.30% |
Matrix_192 | FHY3/FAR1 | Not Available | | 67.19% |
Matrix_251 | PIF5 | Phytochrome interacting factors 4 and 5 control seedling growth in changing light conditions by directly controlling auxin signaling | | 67.00% |
Matrix_108 | PIF4 | Interaction between BZR1 and PIF4 integrates brassinosteroid and environmental responses | | 66.81% |
Matrix_217 | BES1 | A brassinosteroid transcriptional network revealed by genome-wide identification of BESI target genes in Arabidopsis thaliana | | 66.45% |
Matrix_514 | DYT1 | Regulation of the Arabidopsis anther transcriptome by DYT1 for pollen development | | 65.59% |
Matrix_498 | AT2G28710; AT3G46070; AT3G46080; ZAT7 | Not Available | | 65.05% |
Matrix_153 | AP2 | Not Available | | 64.03% |
Matrix_356 | PRR5 | Not Available | | 62.44% |
Matrix_467 | RAV1 | Not Available | | 61.96% |
Matrix_34 | RAV1_2 | RAV1, a novel DNA-binding protein, binds to bipartite recognition sequence through two distinct DNA-binding domains uniquely found in higher plants | | 61.96% |
Matrix_477 | RAV1 | Not Available | | 61.96% |
Matrix_186 | FHY3 | Not Available | | 61.42% |
Matrix_19 | PIF5 | Phytochrome interacting factors 4 and 5 control seedling growth in changing light conditions by directly controlling auxin signaling | | 61.36% |
Motif_504 | LFY | Structural basis for LEAFY floral switch function and similarity with helix-turn-helix proteins | | 61.09% |
Motif_635 | LFY | Structural basis for LEAFY floral switch function and similarity with helix-turn-helix proteins | | 61.09% |
Motif_159 | LFY | Structural basis for LEAFY floral switch function and similarity with helix-turn-helix proteins | | 60.93% |
Motif_527 | LFY | Structural basis for LEAFY floral switch function and similarity with helix-turn-helix proteins | | 60.93% |
Motif_289 | LFY | Structural basis for LEAFY floral switch function and similarity with helix-turn-helix proteins | | 60.93% |
Motif_686 | LFY | Structural basis for LEAFY floral switch function and similarity with helix-turn-helix proteins | | 60.93% |
Matrix_257 | NAC050; ANAC051; anac057; NAC2 | Not Available | | 60.86% |
Matrix_438 | AtbZIP63 | Not Available | | 60.48% |
Matrix_499 | ARR18 | Not Available | | 59.74% |
Matrix_122 | ABF1; AREB2 | Not Available | | 59.32% |
Matrix_480 | BES1 | Not Available | | 59.09% |
Matrix_200 | PIL5; AT4G28790; AT4G28800; AT4G28811; AT4G28815 | Not Available | | 58.94% |
Matrix_123 | FUSCA3 | Not Available | | 58.85% |
Matrix_449 | BIM2 | Not Available | | 58.36% |
Motif_314 | HY5AT | G box; Binding site of Arabidopsis bZIP protein HY5; HY5 is constitutively nuclear localized and is involved in light regulation of transcriptional activity of the promoters containing the G-box;HY5 abundance peaks in early seedling development, consistent with its role in promoting photomorphogenesis; HY5 stability and activity is regulated by phosphorylation in its COP1 binding domain; HY5 regulates stimulus-induced development of root and hypocotyl | | 57.90% |
Matrix_107 | AtSPL3 | Not Available | | 57.31% |
Matrix_304 | AtSPL3 | Functional dissection of the plant-specific SBP-domain: overlap of the DNA-binding and nuclear localization domains | | 57.31% |
Matrix_330 | MYC2; TT8 | Not Available | | 57.18% |
Matrix_323 | BIM3 | Not Available | | 57.03% |
Matrix_290 | AP2 | Not Available | | 56.85% |
Motif_30 | HSELIKENTACIDICPR1 | HSE-like motif in -56 region of acidic PR1 gene of tobacco; not found in basic PR1 gene | | 56.79% |
Matrix_465 | MYC4 | Not Available | | 56.70% |
Matrix_213 | ATHB22 | Not Available | | 56.70% |
Matrix_278 | AtbZIP44 | Not Available | | 56.65% |
Matrix_158 | AT1G03040; LRL1; UNE12; LRL2; LRL3 | Not Available | | 56.55% |
Motif_154 | ABREBNNAPA | ABRE of napA storage-protein gene of Brassica napus; ABA responsive element; dist B ABRE mediated transactivation by ABI3 adn ABI3-dependent response to ABA; a tetramer of the composite RY/G complex mediated only ABA-independent transactivation by ABI3; B2 domain of ABI3 is necessary for ABA-independent and ABA-dependent activation through the dist B ABRE; B3 domain of ABI3 interacts with the RY/G complex | | 56.44% |
Matrix_183 | BES1 | A brassinosteroid transcriptional network revealed by genome-wide identification of BESI target genes in Arabidopsis thaliana | | 56.21% |
Matrix_120 | BEE2 | Not Available | | 56.19% |
Matrix_113 | ABI5 | Not Available | | 55.92% |
Matrix_161 | MYBC1; AT3G10760; LUX; AT5G05090; AT5G59570 | Not Available | | 55.34% |
Matrix_129 | ABF1 | Not Available | | 55.32% |
Matrix_433 | ATERF1 | Not Available | | 55.24% |
Matrix_491 | AT1G68670; AT3G25790 | Not Available | | 55.17% |
Matrix_389 | ILR3 | Not Available | | 55.12% |
Matrix_156 | POC1 | Not Available | | 54.98% |
Matrix_18 | AP3 | Not Available | | 54.86% |
Matrix_331 | GBF1 | Not Available | | 54.81% |
Matrix_406 | ATERF-7 | Not Available | | 54.79% |
Matrix_508 | APL; AT3G12730; AT3G24120; UNE16 | Not Available | | 54.56% |
Matrix_80 | BIM1 | Not Available | | 54.48% |
Matrix_36 | RAV1_1 | RAV1, a novel DNA-binding protein, binds to bipartite recognition sequence through two distinct DNA-binding domains uniquely found in higher plants | | 54.40% |
Matrix_298 | RAV1 | Not Available | | 54.40% |
Matrix_413 | RAV1 | Not Available | | 54.40% |
Matrix_448 | ATERF6 | Not Available | | 54.36% |
Matrix_195 | GATA2; GATA4 | Not Available | | 54.34% |
Matrix_33 | SPL11; SPL10; SPL2 | Not Available | | 54.20% |
Motif_173 | HSE | HSE (heat shock response element); consensus sequence found in the promoter regions of heat shock protein genes; HSF binding site; HsfA3, a new member of the Hsf (heat stress transcription factor) family; was isolated by yeast two-hybrid screening, using HsfA1 as a bait; HsfA3 is a single copy gene with all conserved sequence elements characteristic of a heat stress transcription factor | | 54.16% |
Matrix_418 | KNAT6; KNAT2 | Not Available | | 54.05% |
Matrix_502 | AT3G13040 | Not Available | | 53.98% |
Matrix_462 | ATERF-8 | Not Available | | 53.98% |
Matrix_69 | AT2G03500 | Not Available | | 53.96% |
Matrix_256 | IXR11; KNAT5; KNAT4; KNAT3 | Not Available | | 53.95% |
Matrix_50 | ATERF14; AT5G43410 | Not Available | | 53.90% |
Motif_120 | ABRETAEM | ABRE (ABA responsive element) found in wheat Em gene; transacting factor: EMBP-1; EMBP-1 binds to CACGTGGC | | 53.72% |
Matrix_456 | bZIP60 | Not Available | | 53.69% |
Matrix_404 | OBP4 | Not Available | | 53.67% |
Matrix_172 | BES1 | A brassinosteroid transcriptional network revealed by genome-wide identification of BESI target genes in Arabidopsis thaliana | | 53.63% |
Matrix_428 | SEP4 | Not Available | | 53.61% |
Matrix_361 | AT1G25550 | Not Available | | 53.57% |
Matrix_226 | GATA1 | Not Available | | 53.55% |
Matrix_109 | GBF3 | Not Available | | 53.40% |
Matrix_16 | AT3G04450; PHL1 | Not Available | | 53.37% |
Matrix_324 | AT2G01060 | Not Available | | 53.36% |
Matrix_222 | AGL2 | DNA binding properties of two Arabidopsis MADS domain proteins: binding consensus and dimer formation | | 53.34% |
Matrix_28 | SEP1 | Not Available | | 53.34% |
Matrix_56 | BZIP17; BZIP28; BZIP49 | Not Available | | 53.34% |
Matrix_440 | LFY | Not Available | | 53.30% |
Matrix_68 | AtMYB77 | More than 80 R2R3-MYB regulatory genes in the genome of Arabidopsis thaliana. Plant J 14: 273-84 | | 53.29% |
Matrix_47 | AtMYB77 | Not Available | | 53.29% |
Matrix_355 | ERF10; ERF11 | Not Available | | 53.20% |
Matrix_121 | SHP1 | Not Available | | 53.17% |
Matrix_386 | AGL1 | DNA binding properties of two Arabidopsis MADS domain proteins: binding consensus and dimer formation | | 53.17% |
Matrix_287 | ERF2 | Not Available | | 53.10% |
Matrix_339 | bHLH104 | Not Available | | 53.08% |
Matrix_162 | AtPHR1 | Not Available | | 53.08% |
Matrix_446 | LBD16 | Not Available | | 53.06% |
Matrix_43 | AG | Not Available | | 53.05% |
Matrix_445 | AG | Not Available | | 53.05% |
Matrix_98 | AG | Isolation and characterization of the binding sequences for the product of the Arabidopsis floral homeotic gene AGAMOUS | | 53.05% |
Matrix_184 | AGL15 | Not Available | | 53.04% |
Matrix_301 | PIL5 | Not Available | | 52.94% |
Matrix_463 | HAT3.1 | Not Available | | 52.88% |
Matrix_352 | LEC2 | Not Available | | 52.79% |
Matrix_277 | RAP2.6 | Not Available | | 52.76% |
Matrix_420 | ANAC58 | Not Available | | 52.76% |
Matrix_176 | MYB98 | Not Available | | 52.62% |
Matrix_282 | bZIP60 | Not Available | | 52.59% |
Matrix_464 | AGL15; AGL71 | Not Available | | 52.58% |
Matrix_419 | TGA9; PAN; TGA6; bZIP65 | Not Available | | 52.50% |
Matrix_228 | TGA2 | Not Available | | 52.46% |
Matrix_326 | AT5G07310; Rap2.6L; AT5G61890 | Not Available | | 52.42% |
Matrix_210 | ARR1 | Not Available | | 52.38% |
Matrix_408 | GATA12 | Not Available | | 52.36% |
Matrix_151 | ASIL1 | Not Available | | 52.33% |
Matrix_211 | MYB3 | Not Available | | 52.32% |
Matrix_454 | AT1G77200; ATERF38; AT4G16750; AT5G52020 | Not Available | | 52.31% |
Matrix_273 | ANAC55 | Not Available | | 52.26% |
Matrix_247 | PIF3 | Not Available | | 52.16% |
Matrix_4 | ARR14 | Not Available | | 52.01% |
Matrix_311 | TGA1 | Not Available | | 51.96% |
Motif_180 | AGL2 binding site motif | Binding consensus sequence of Arabidopsis AGL2 (AGAMOUS-like 2); AGL2 contains MADS domain; AGL2 binds DNA as a dimer | | 51.95% |
Matrix_2 | SEP4 | Not Available | | 51.93% |
Matrix_310 | AGL3 | The Arabidopsis MADS-box gene AGL3 is widely expressed and encodes a sequence-specific DNA-binding protein | | 51.93% |
Matrix_417 | SEP4 | Not Available | | 51.93% |
Matrix_283 | GATA15; GATA17; AT4G16141; GATA22; GATA23; GATA16; GNC | Not Available | | 51.89% |
Matrix_306 | TGA1 | TGA1 and G-box binding factors: two distinct classes of Arabidopsis leucine zipper proteins compete for the G-box-like element TGACGTGG | | 51.83% |
Matrix_101 | ERF5 | Not Available | | 51.80% |
Matrix_209 | RAP2.6 | Not Available | | 51.73% |
Matrix_328 | AT1G76580 | Not Available | | 51.72% |
Matrix_66 | AtLEC2 | Genes directly regulated by LEAFY COTYLEDON2 provide insight into the control of embryo maturation and somatic embryogenesis | | 51.72% |
Matrix_53 | MYC3 | Not Available | | 51.62% |
Matrix_271 | AT3G16350 | Not Available | | 51.60% |
Matrix_171 | LBD3; LBD4 | Not Available | | 51.60% |
Matrix_432 | AT1G77920 | Not Available | | 51.60% |
Matrix_317 | AT1G06070; AT2G31370; AT2G40620 | Not Available | | 51.57% |
Motif_300 | ACGTROOT1; HY5 | Arabidopsis bZIP protein HY5 directly interacts with light-responsive promoters in mediating light control of gene expression. ACGT motif related to root expression; Gene: synthetic; perfect palindromic sequence (PA) containing G-box-related sequence; transacting factor: TAF-1; Binding of SGBF-1 (a Soybean G-box binding bZIP transcription factor) to ABRE is enhanced by SCOF-1 (a zinc finger protein ); Transcription of SCOF-1 is induced by low temperature and ABA | | 51.55% |
Matrix_22 | BES1 | A brassinosteroid transcriptional network revealed by genome-wide identification of BESI target genes in Arabidopsis thaliana | | 51.54% |
Matrix_343 | AT2G33710 | Not Available | | 51.52% |
Matrix_128 | TGA2 | Not Available | | 51.44% |
Motif_542 | ABI5; AtMYC2; HY5 | A basic helix-loop-helix transcription factor in Arabidopsis, MYC2, acts as a repressor of blue light-mediated photomorphogenic growth. Arabidopsis bZIP protein HY5 directly interacts with light-responsive promoters in mediating light control of gene expression. The homologous ABI5 and EEL transcription factors function antagonistically to fine-tune gene expression during late embryogenesis | | 51.39% |
Matrix_87 | AT1G19000 | Not Available | | 51.24% |
Matrix_515 | ddf2; ATCBF3; CBF1; CBF4 | Not Available | | 51.11% |
Matrix_409 | DEAR3 | Not Available | | 51.03% |
Matrix_322 | NST3; ANAC015; BRN2 | Not Available | | 51.02% |
Matrix_135 | ABI3 | Not Available | | 50.96% |
Motif_418 | ABRE2HVA22 | ABRE2 of barley HVA22 gene; G-box; component of ABA response complex in HVA22 gene; see ABRE3 of HVA22 gene; see CE1 (coupling element 1 = TGCCACCGG) | | 50.95% |
Matrix_518 | AT2G21230 | Not Available | | 50.91% |
Matrix_70 | GATA26 | Not Available | | 50.89% |
Motif_92 | ABREATRD22 | ABRE (ABA responsive element) in Arabidopsis dehydration-responsive gene rd22 | | 50.86% |
Matrix_57 | WIN1; SHN3; SHN2 | Not Available | | 50.80% |
Motif_112 | GBOX10NT | One of 11 G-box sequences in tobacco; Required for high-level constitutive expression in seed, leaf, root, axillary bud, almost all parts of flower buds and pollen | | 50.72% |
Matrix_481 | BES1 | A brassinosteroid transcriptional network revealed by genome-wide identification of BESI target genes in Arabidopsis thaliana | | 50.61% |
Matrix_169 | E2F1 | Not Available | | 50.45% |
Matrix_332 | SPT; ALC | Not Available | | 50.38% |
Matrix_357 | WRKY61; WRKY6; WRKY9; WRKY36; WRKY47; WRKY42; WRKY31; WRKY72 | Not Available | | 50.35% |
Matrix_286 | GATA7 | Not Available | | 50.32% |
Matrix_14 | ZCW32; AT5G62610 | Not Available | | 50.27% |
Matrix_201 | AT1G74840 | Not Available | | 50.27% |
Matrix_154 | AT1G22190; AT1G36060; AT1G64380; RAP2.4; AT2G20880; AT2G22200; AT4G13620; AT4G28140; AT4G39780; AT5G65130 | Not Available | | 50.26% |
Matrix_206 | CUC1; ANAC100 | Not Available | | 50.23% |
Matrix_363 | RAP2.3 | Not Available | | 50.18% |
Matrix_141 | AT3G25990 | Not Available | | 50.18% |
Matrix_166 | TGA4 | Not Available | | 50.12% |
Matrix_373 | E2FE | Not Available | | 50.05% |
Matrix_227 | AT1G64620 | Not Available | | 50.05% |