Matrix_520 | ARR14 | Not Available | | 73.34% |
Matrix_434 | ARR11 | Not Available | | 70.43% |
Matrix_410 | TOE2 | Not Available | | 69.32% |
Matrix_350 | ARR14 | Not Available | | 68.58% |
Matrix_283 | GATA15; GATA17; AT4G16141; GATA22; GATA23; GATA16; GNC | Not Available | | 68.05% |
Matrix_195 | GATA2; GATA4 | Not Available | | 67.61% |
Matrix_402 | TOE1 | Not Available | | 67.39% |
Matrix_230 | ARR11 | Not Available | | 67.25% |
Matrix_505 | GATA8 | Not Available | | 67.10% |
Matrix_408 | GATA12 | Not Available | | 67.05% |
Matrix_366 | ARR14 | Not Available | | 66.94% |
Matrix_38 | SPL14 | Not Available | | 66.43% |
Matrix_157 | LHY; RVE2 | Not Available | | 66.27% |
Matrix_236 | CCA1 | Not Available | | 65.95% |
Matrix_226 | GATA1 | Not Available | | 65.87% |
Matrix_286 | GATA7 | Not Available | | 63.87% |
Motif_523 | GATA-2; GATA-4; GATA-3; GATA-1 | Arabidopsis thaliana GATA factors: organisation, expression and DNA-binding characteristics | | 63.82% |
Matrix_203 | GATA9; GATA12 | Not Available | | 63.24% |
Matrix_71 | ATHB7 | Not Available | | 63.01% |
Matrix_241 | HB-1; AT5G44180 | Not Available | | 61.52% |
Matrix_391 | AHL20 | Not Available | | 61.46% |
Matrix_302 | HAT1; HAT2 | Not Available | | 61.35% |
Matrix_276 | AT1G01520; AT3G09600; AT4G01280; LCL1; AT5G52660 | Not Available | | 61.33% |
Matrix_461 | ATHB12 | Not Available | | 60.99% |
Matrix_256 | IXR11; KNAT5; KNAT4; KNAT3 | Not Available | | 60.88% |
Matrix_246 | ARR10 | Molecular structure of the GARP family of plant Myb-related DNA binding motifs of the Arabidopsis response regulators | | 60.66% |
Matrix_99 | DOF4.7 | Not Available | | 60.49% |
Matrix_471 | KAN4 | Not Available | | 60.29% |
Matrix_181 | Dof5.7 | Not Available | | 60.00% |
Matrix_182 | ATHB6 | Not Available | | 59.96% |
Motif_677 | AGL22; AGL20; AGL24 | Regulation of floral patterning by flowering time genes | | 59.81% |
Matrix_447 | RVE1 | Not Available | | 59.74% |
Matrix_418 | KNAT6; KNAT2 | Not Available | | 59.63% |
Matrix_255 | cdf3 | Not Available | | 59.62% |
Matrix_411 | DOF5.6 | Not Available | | 59.56% |
Matrix_37 | GATA27 | Not Available | | 59.37% |
Motif_475 | GATA-1 | Arabidopsis thaliana GATA factors: organisation, expression and DNA-binding characteristics | | 59.15% |
Motif_637 | SARD1; CBP60g | Control of salicylic acid synthesis and systemic acquired resistance by two members of a plant-specific family of transcription factors | | 59.04% |
Matrix_185 | AHL25 | Not Available | | 58.98% |
Matrix_271 | AT3G16350 | Not Available | | 58.82% |
Matrix_87 | AT1G19000 | Not Available | | 58.76% |
Motif_582 | ARR1; ARR2 | Arabidopsis ARR1 and ARR2 response regulators operate as transcriptional activators | | 58.74% |
Matrix_160 | RVE1 | Not Available | | 58.73% |
Matrix_522 | GATA11; GATA13 | Not Available | | 58.64% |
Motif_464 | ARR1; ARR2 | Arabidopsis ARR1 and ARR2 response regulators operate as transcriptional activators | | 58.61% |
Matrix_177 | ADOF2 | Not Available | | 58.57% |
Matrix_176 | MYB98 | Not Available | | 58.45% |
Motif_347 | OPAQUE2ZMB32 | opaque-2 binding site of maize b-32 (type I ribosome-inactivating protein gene); O2; O2S; O2S and GARE form a gibberellin response complex (GARC) | | 58.41% |
Matrix_519 | ATDOF2.4 | Not Available | | 58.27% |
Motif_561 | GATA-2; GATA-4; GATA-3; GATA-1 | Arabidopsis thaliana GATA factors: organisation, expression and DNA-binding characteristics | | 58.12% |
Matrix_383 | CCA1 | Not Available | | 58.11% |
Matrix_175 | Dof5.7 | Not Available | | 58.03% |
Matrix_512 | HAT3 | Not Available | | 57.95% |
Motif_465 | AtMYB44 | Two novel MYB homologues with changed expression in late embryogenesis-defective Arabidopsis mutants | | 57.89% |
Matrix_502 | AT3G13040 | Not Available | | 57.81% |
Motif_345 | GT-1 | Molecular dissection of GT-1 from Arabidopsis | | 57.78% |
Matrix_76 | GATA10 | Not Available | | 57.65% |
Matrix_425 | TIFY2A | Not Available | | 57.60% |
Matrix_336 | AT5G08520 | Not Available | | 57.54% |
Motif_188 | CDA1ATCAB2 | CDA-1 (CAB2 DET1-associated factor 1) binding site in DtRE (dark response element) f of chlorophyll a/b-binding protein2 (CAB2) gene in Arabidopsis | | 57.39% |
Matrix_361 | AT1G25550 | Not Available | | 57.21% |
Matrix_324 | AT2G01060 | Not Available | | 57.03% |
Matrix_199 | AT1G69170; SPL9; SPL15; SPL13A; SPL13B | Not Available | | 56.99% |
Matrix_69 | AT2G03500 | Not Available | | 56.88% |
Matrix_106 | AT5G47390 | Not Available | | 56.68% |
Matrix_487 | AT1G29160 | Not Available | | 56.54% |
Matrix_114 | EPR1; AT3G10113 | Not Available | | 56.53% |
Matrix_218 | TIFY2B; TIFY1 | Not Available | | 56.38% |
Matrix_25 | AP3 | Not Available | | 56.27% |
Motif_420 | SORLREP2AT | one of Sequences Over-Represented in Light-Repressed Promoters (SORLREPs) in Arabidopsis; Computationally identified phyA-repressed motifs; See also all SORLREPs and all SORLIPs; Identification of key promoter motifs involved in the network of light-regulated gene expression by combined analysis of genomic sequence and microarray data | | 56.21% |
Matrix_357 | WRKY61; WRKY6; WRKY9; WRKY36; WRKY47; WRKY42; WRKY31; WRKY72 | Not Available | | 56.10% |
Motif_556 | INTRONUPPER | 5' exon-intron splice junctions of plant introns; Plant intron upper sequence; Consensus sequence for plant introns | | 56.09% |
Matrix_491 | AT1G68670; AT3G25790 | Not Available | | 56.08% |
Matrix_489 | RAV1 | Not Available | | 55.86% |
Matrix_10 | STY1 | Not Available | | 55.74% |
Motif_500 | D1GMAUX28 | D1; DNase I protected sequence found in the soybean auxin responsive gene, Aux28, promoter; D1 and D4 share a very similar core sequence TAGTXXCTGT and TAGTXCTGT, respectively; D1/D4-like sequence were identified in several other auxin-responsive genes; Binding site of GmGT-2 which is the GT-2 family of transcription factors; GmGT-2 are down-regulated by light in a phytochrome-dependent manner | | 55.70% |
Matrix_16 | AT3G04450; PHL1 | Not Available | | 55.52% |
Matrix_280 | TCP24; TCP1; BRC2; ATTCP18 | Not Available | | 55.39% |
Matrix_6 | AT1G70000 | Not Available | | 55.36% |
Matrix_201 | AT1G74840 | Not Available | | 55.18% |
Matrix_85 | SPL5 | Not Available | | 55.12% |
Matrix_207 | WRKY10; WRKY57; AT2G44745; ATWRKY13; WRKY49 | Not Available | | 55.11% |
Matrix_421 | GLK1 | Not Available | | 54.96% |
Matrix_72 | CDF2 | Not Available | | 54.95% |
Matrix_508 | APL; AT3G12730; AT3G24120; UNE16 | Not Available | | 54.91% |
Matrix_384 | ATWRKY17 | Not Available | | 54.82% |
Matrix_347 | WOX14; WOX10 | Not Available | | 54.81% |
Motif_181 | IBOXCORENT | I-box core motif in the CAMs (conserved DNA modular arrays) associated with light-responsive promoter regions | | 54.81% |
Matrix_8 | KAN1 | Not Available | | 54.76% |
Matrix_12 | EIN3; EIL2 | Not Available | | 54.73% |
Matrix_370 | WRKY50; WRKY51 | Not Available | | 54.70% |
Matrix_17 | WRKY22 | Not Available | | 54.63% |
Matrix_180 | SPL1 | Not Available | | 54.42% |
Matrix_423 | AT3G04030 | Not Available | | 54.36% |
Matrix_162 | AtPHR1 | Not Available | | 54.31% |
Matrix_435 | ATHB51 | Not Available | | 54.24% |
Matrix_442 | AT5G62260 | Not Available | | 54.24% |
Matrix_351 | HAT9; ATHB-4; ATHB2; HAT22; HAT14 | Not Available | | 54.19% |
Motif_579 | WRECSAA01 | Wound-responsive element (WRE) found in the promoter region of cucumber ascorbate oxidase gene, CsAAO1; Binding site of proteins in tobacco nuclear extracts | | 54.14% |
Matrix_317 | AT1G06070; AT2G31370; AT2G40620 | Not Available | | 54.11% |
Matrix_46 | AT4G21895 | Not Available | | 54.09% |
Matrix_521 | AHL20 | Not Available | | 54.05% |
Matrix_67 | GLK1 | Not Available | | 54.02% |
Matrix_168 | AHL25 | Not Available | | 54.00% |
Matrix_78 | AT3G45610 | Not Available | | 53.94% |
Matrix_303 | ATWOX13 | Not Available | | 53.86% |
Matrix_254 | MYB52 | Not Available | | 53.83% |
Matrix_210 | ARR1 | Not Available | | 53.74% |
Matrix_65 | POC1; PIL1 | Not Available | | 53.66% |
Motif_131 | P1BS | PHR1-binding sequence found in the upstream regions of phosphate starvation responsive genes from several plant species; phr1 (phosphate starvation response 1) gene codes for PHR1 protein related to PSR1 gene in C. reinhardtii | | 53.56% |
Matrix_328 | AT1G76580 | Not Available | | 53.50% |
Matrix_75 | WRKY29 | Not Available | | 53.39% |
Matrix_308 | INO | Not Available | | 53.38% |
Matrix_89 | SOC1 | Genome-wide identification of SOC1 and SVP targets during the floral transition in Arabidopsis | | 53.37% |
Motif_408 | EVENINGAT | Evening element found 46 times in the promoters of 31 cycling genes in Arabidopsis thaliana; Required for circadian control of gene expression; EE (evening element) motif; Also found in the promoter of the Solanum melongena gene encoding cysteine protease, and identified as cis-element for its circadian regulation;Orchestrated transcription of key pathways in Arabidopsis by the circadian clock | | 53.23% |
Matrix_312 | ARF11; MP; ARF6; IAA21; ARF8; ARF4 | Not Available | | 53.11% |
Matrix_416 | ASL5 | Not Available | | 53.10% |
Matrix_97 | APRR2 | Not Available | | 53.10% |
Motif_52 | GATA-1 | Arabidopsis thaliana GATA factors: organisation, expression and DNA-binding characteristics | | 53.03% |
Matrix_3 | WRKY48 | Not Available | | 53.02% |
Matrix_268 | EMB2749; VND5; SMB; VND1; ANAC076; NAC101; ANAC105 | Not Available | | 52.96% |
Matrix_81 | YAB1 | Not Available | | 52.87% |
Matrix_63 | ARR10 | Not Available | | 52.85% |
Matrix_102 | WRKY21 | Not Available | | 52.84% |
Matrix_80 | BIM1 | Not Available | | 52.64% |
Matrix_4 | ARR14 | Not Available | | 52.62% |
Matrix_212 | ATHB-12 | Not Available | | 52.59% |
Matrix_248 | ZFP5 | Not Available | | 52.54% |
Matrix_204 | WOX13 | Not Available | | 52.53% |
Matrix_263 | WRKY33; WRKY19; WRKY32 | Not Available | | 52.46% |
Matrix_231 | HDG2; HDG3; ATML1; HB-7 | Not Available | | 52.43% |
Motif_309 | GATA promoter motif | Arabidopsis thaliana GATA factors: organisation, expression and DNA-binding characteristics | | 52.39% |
Matrix_135 | ABI3 | Not Available | | 52.35% |
Matrix_227 | AT1G64620 | Not Available | | 52.34% |
Matrix_501 | DAG2 | Not Available | | 52.27% |
Matrix_93 | YAB5 | Not Available | | 52.16% |
Matrix_165 | KNAT1 | Not Available | | 52.16% |
Matrix_142 | ZFP8 | Not Available | | 52.05% |
Motif_381 | GATA-2; GATA-4; GATA-3; GATA-1 | Arabidopsis thaliana GATA factors: organisation, expression and DNA-binding characteristics | | 51.98% |
Motif_495 | TRANSINITMONOCOTS | Context sequence of translational initiation codon in monocots | | 51.98% |
Motif_222 | AGMOTIFNTMYB2 | AG-motif found at -114 of the promoter of NtMyb2 gene; NtMyb2 is a regulator of the tobacco retrotransposon Tto1 and the defence-related gene phenylalanine ammonia lyase (PAL), which are induced by various stress such as wounding or elicitor treatment; AGP1 (GATA-type zinc finger protein) binding site | | 51.86% |
Matrix_481 | BES1 | A brassinosteroid transcriptional network revealed by genome-wide identification of BESI target genes in Arabidopsis thaliana | | 51.85% |
Matrix_220 | WRKY18 | Not Available | | 51.81% |
Matrix_79 | FUS3 | Not Available | | 51.68% |
Matrix_88 | AHL12 | Not Available | | 51.66% |
Matrix_21 | HSFC1 | Not Available | | 51.62% |
Motif_632 | EREGCC | GCC box in ERE (ethylene responsive element); Ethylene-responsive region of tobacco (N.t.) chitinase gene contains two copies of the GCC-box; ERF2 and ERF4 enhanced the GCC box-mediated transcription; ERF3 reduced the transcription of the reporter gene in tobacco protoplasts; Binding site of AtEBP; Pti4/5/6 proteins from tomato which belong to the ERF family activate the expression of GCC box-containing PR genes; ERF3 was found to interact with NtUBC2, a ubiquitin-conjugating enzyme; Identification of an ethylene-responsive region in the promoter of a tobacco class I chitinase gene | | 51.60% |
Matrix_429 | KAN4 | Not Available | | 51.57% |
Motif_248 | L1-box | Arabidopsis DELLA and two HD-ZIP transcription factors regulate GA signaling in the epidermis through the L1 box cis-element | | 51.51% |
Matrix_274 | EDF3 | Not Available | | 51.45% |
Motif_155 | NODCON1GM | One of two putative nodulin consensus sequences; See also NODCON2GM; One of the consensus sequence motifs of organ-specific elements (OSE) characteristic of the promoters activated in infected cells of root nodules | | 51.44% |
Matrix_101 | ERF5 | Not Available | | 51.44% |
Motif_673 | Bellringer/replumless/pennywise BS2 IN AG | Repression of AGAMOUS by BELLRINGER in Floral and Inflorescence Meristems | | 51.38% |
Matrix_131 | HDG12; EDT1; GL2; HDG8 | Not Available | | 51.35% |
Matrix_259 | AT1G50680; AT1G51120 | Not Available | | 51.34% |
Matrix_26 | ATMYB3; MYB24 | Not Available | | 51.25% |
Matrix_354 | AHL12 | Not Available | | 51.24% |
Motif_91 | SORLIP4AT | one of Sequences Over-Represented in Light-Induced Promoters (SORLIPs) in Arabidopsis; Computationally identified phyA-induced motifs; Identification of key promoter motifs involved in the network of light-regulated gene expression by combined analysis of genomic sequence and microarray data | | 51.18% |
Motif_41 | ARR2 | Arabidopsis ARR1 and ARR2 response regulators operate as transcriptional activators | | 51.15% |
Motif_190 | WUSATAg | Target sequence of WUS in the intron of AGAMOUS gene in Arabidopsis | | 51.15% |
Matrix_494 | OBP4 | Not Available | | 51.06% |
Matrix_249 | WRKY11 | Not Available | | 51.00% |
Matrix_96 | TMO6 | Not Available | | 50.78% |
Matrix_152 | EIL1; AT5G65100 | Not Available | | 50.77% |
Matrix_141 | AT3G25990 | Not Available | | 50.76% |
Matrix_452 | MYB46 | Not Available | | 50.75% |
Matrix_333 | GATA3 | Not Available | | 50.70% |
Matrix_56 | BZIP17; BZIP28; BZIP49 | Not Available | | 50.66% |
Motif_610 | GATA-2; GATA-4; GATA-3; GATA-1 | Arabidopsis thaliana GATA factors: organisation, expression and DNA-binding characteristics | | 50.60% |
Motif_549 | TBF1 | The HSF-like transcription factor TBF1 is a major molecular switch for plant growth-to-defense transition | | 50.60% |
Matrix_70 | GATA26 | Not Available | | 50.60% |
Matrix_311 | TGA1 | Not Available | | 50.57% |
Matrix_287 | ERF2 | Not Available | | 50.48% |
Matrix_392 | ARR2 | Not Available | | 50.44% |
Matrix_171 | LBD3; LBD4 | Not Available | | 50.41% |
Motif_183 | TRANSINITDICOTS | Context sequence of translational initiation codon in dicots | | 50.24% |
Matrix_139 | OBF5 | Not Available | | 50.20% |
Matrix_397 | GT2L | Not Available | | 50.14% |
Matrix_430 | TOE2 | Not Available | | 50.01% |