Matrix_159 | TEM2 | Not Available | | 95.47% |
Matrix_291 | EDF3 | Not Available | | 91.22% |
Motif_356 | S2FSORPL21 | S2F binding site (S2 site) in spinach RPL21 gene encoding the plastid ribosomal protein L21; S2 site (CATACAWW) is conserved in promoter region of many nuclear genes encoding plastid proteins; Leaf-specific, light-independent regulatory element; S2 site is related to but different from the light-responsive GT-1 binding site | | 63.31% |
Motif_260 | MYB98 | MYB98 positively regulates a battery of synergid-expressed genes encoding filiform apparatus localized proteins | | 63.05% |
Motif_520 | AMYBOX1 | amylase box; Conserved sequence found in 5'-upstream region of alpha-amylase gene of rice, wheat, barley | | 62.32% |
Motif_351 | GARE1OSREP1 | Gibberellin-responsive element (GARE) found in the promoter region of a cystein proteinase (REP-1) gene in rice | | 61.19% |
Motif_410 | ANAERO1CONSENSUS | One of 16 motifs found in silico in promoters of 13 anaerobic genes involved in the fermentative pathway (anaerobic set 1); Arbitrary named ANAERO1CONSENSUS by the PLACEdb curator | | 61.08% |
Matrix_312 | ARF11; MP; ARF6; IAA21; ARF8; ARF4 | Not Available | | 60.94% |
Motif_447 | AtMYC2 BS in RD22; PIF4 | Binding site for MYC (rd22BP1) in Arabidopsis dehydration-resposive gene, rd22; MYC binding site in rd22 gene of Arabidopsis thaliana; ABA-induction; Located at ca. -200 of rd22 gene; Also MYB at ca. -141 of rd22 gene; See also MYBATRD22; Role of Arabidopsis MYC and MYB homologs in drought- and abscisic acid-regulated gene expression. Interaction between BZR1 and PIF4 integrates brassinosteroid and environmental responses | | 60.22% |
Motif_559 | RAV1-A binding site motif; RAV1AAT | Binding consensus sequence of Arabidopsis transcription factor, RAV1; RAV1 specifically binds to DNA with bipartite sequence motifs of RAV1-A (CAACA) and RAV1-B (CACCTG); RAV1 protein contain AP2-like and B3-like domains; The AP2-like and B3-like domains recognize the CAACA and CACCTG motifs, respectively; The expression level of RAV1 were relatively high in rosette leaves and roots; RAV1, a novel DNA-binding protein, binds to bipartite recognition sequence through two distinct DNA-binding domains uniquely found in higher plants | | 59.91% |
Motif_502 | MYB98 | The MYB98 subcircuit of the synergid gene regulatory network includes genes directly and indirectly regulated by MYB98 | | 59.84% |
Motif_104 | CAREOSREP1 | CAREs (CAACTC regulatory elements) found in the promoter region of a cystein proteinase (REP-1) gene in rice | | 59.71% |
Motif_614 | MYBGAHV | Central element of gibberellin (GA) response complex (GARC) in high-pI alpha-amylase gene in barley; Similar to c-myb and v-myb consensus binding site; GAmyb binds specifically to the TAACAAA box in vitro; GAmyb is the sole GA-regulated transcriptional factor required for transcriptional activation of the high-pI alpha-amylase; GARC consist of the pyrimidine, TAACAAA and TATCCAC boxes; GARE in RAmy1A gene; GARE and pyrimidine box in RAmy1A are partially involved in sugar repression | | 59.37% |
Motif_70 | CANBNNAPA | Core of (CA)n element in storage protein genes in Brasica napus; embryo- and endosperm-specific transcription of napin (storage protein) gene, napA; seed specificity; activator and repressor | | 59.35% |
Motif_296 | MYB98 | MYB98 positively regulates a battery of synergid-expressed genes encoding filiform apparatus localized proteins | | 58.99% |
Motif_141 | BP5OSWX | OsBP-5 (a MYC protein) binding site in Wx promoter | | 58.75% |
Motif_317 | GAREAT | GARE (GA-responsive element); Occurrence of GARE in GA-inducible, GA-responsible, and GA-nonresponsive genes found in Arabidopsis seed germination was 20, 18, and 12%, respectively | | 58.57% |
Motif_609 | AP2 | The floral homeotic protein APETALA2 recognizes and acts through an AT-rich sequence element | | 57.78% |
Matrix_165 | KNAT1 | Not Available | | 57.03% |
Motif_139 | RHERPATEXPA7 | Right part of RHEs (Root Hair-specific cis-Elements) conserved among the Arabidopsis thaliana A7 (AtEXPA7) orthologous (and paralogous) genes from diverse angiosperm species with different hair distribution patterns | | 56.81% |
Matrix_292 | FTQ4 | Not Available | | 56.75% |
Motif_28 | POLLEN2LELAT52 | One of two co-dependent regulatory elements responsible for pollen specific activation of tomato lat52 gene; Found at -60 to -52 region; See POLLEN1LELAT52; AGAAA and TCCACCATA are required for pollen specific expression | | 56.35% |
Motif_435 | E2FBNTRNR | E2Fb found in the tobacco RNR (Ribonucleotide reductase) gene promoter; Binding site of tobacco E2F; Involved in upregulation of the promoter at G1/S transition; dE2F (distal reverse E2F element) important for regulating specific RNR1a gene expression in respsonse to UV-C irradiation | | 56.11% |
Matrix_126 | RBE | Not Available | | 55.96% |
Motif_184 | PROXBBNNAPA | prox B (proximal portion of B-box) found in napA gene of Brassica napus; CA-rich sequence; Found between -130 and -124; Required for seed specific expression and ABA responsiveness; dist B ABRE mediated transactivation by ABI3 adn ABI3-dependent response to ABA; a tetramer of the composite RY/G complex mediated only ABA-independent transactivation by ABI3; B2 domain of ABI3 is necessary for ABA-independent and ABA-dependent activation through the dist B ABRE | | 55.94% |
Motif_546 | AtWER | Regulation of CAPRICE transcription by MYB proteins for root epidermis differentiation in Arabidopsis | | 55.75% |
Motif_27 | MYB98 | MYB98 positively regulates a battery of synergid-expressed genes encoding filiform apparatus localized proteins | | 55.66% |
Matrix_100 | AT1G48610 | Not Available | | 55.40% |
Matrix_509 | LEC2 | Not Available | | 55.37% |
Motif_212 | GARE2OSREP1 | Gibberellin-responsive element (GARE) found in the promoter region of a cystein proteinase (REP-1) gene in rice | | 55.16% |
Matrix_519 | ATDOF2.4 | Not Available | | 55.04% |
Motif_172 | MYB98 | MYB98 positively regulates a battery of synergid-expressed genes encoding filiform apparatus localized proteins | | 54.78% |
Motif_649 | 2SSEEDPROTBANAPA | Conserved in many storage-protein gene promoters; May be important for high activity of the napA promoter | | 54.74% |
Motif_682 | GT1GMSCAM4 | GT-1 motif found in the promoter of soybean CaM isoform, SCaM-4; Plays a role in pathogen- and salt-induced SCaM-4 gene expression | | 54.27% |
Motif_182 | MYB2CONSENSUSAT | MYB recognition site found in the promoters of the dehydration-responsive gene rd22 and many other genes in Arabidopsis; see MYB2 and MYBATRD22 | | 53.86% |
Matrix_379 | RHL41 | Not Available | | 53.72% |
Matrix_393 | REM1 | Not Available | | 53.59% |
Motif_658 | GT1CONSENSUS | Consensus GT-1 binding site in many light-regulated genes, e.g., RBCS from many species, PHYA from oat and rice, spinach RCA and PETA, and bean CHS15; GT-1 can stabilize the TFIIA-TBP-DNA (TATA box) complex; The activation mechanism of GT-1 may be achieved through direct interaction between TFIIA and GT-1; Binding of GT-1-like factors to the PR-1a promoter influences the level of SA-inducible gene expression | | 53.54% |
Motif_249 | DPBF1&2 binding site motif | A novel class of bZIP transcription factors, DPBF-1 and 2 (Dc3 promoter-binding factor-1 and 2) binding core sequence; Found in the carrot Dc3 gene promoter; Dc3 expression is normally embryo-specific, and also can be induced by ABA; The Arabidopsis abscisic acid response gene ABI5 encodes a bZIP transcription factor; abi5 mutant have a pleiotropic defects in ABA response; ABI5 regulates a subset of late embryogenesis-abundant genes; GIA1 (growth-insensitivity to ABA) is identical to ABI5; Isolation of a novel class of bZIP transcription factors that interact with ABA-responsive and embryo-specification elements in the Dc3 promoter using a modified yeast one-hybrid system | | 53.42% |
Matrix_7 | PIF4 | Not Available | | 53.36% |
Matrix_164 | AT1G02030; AT2G45120; AZF2; AT3G60580 | Not Available | | 52.97% |
Matrix_511 | AT1G05805; AT1G35460; AT1G51140; AT2G42280; AT2G43140; AT4G09180 | Not Available | | 52.97% |
Matrix_503 | AT2G37430; AT3G53600 | Not Available | | 52.93% |
Matrix_411 | DOF5.6 | Not Available | | 52.92% |
Matrix_460 | NAM; anac025; ATNAC2 | Not Available | | 52.81% |
Matrix_198 | STZ; C2H2; AZF3 | Not Available | | 52.62% |
Matrix_239 | AT5G04390 | Not Available | | 52.53% |
Motif_688 | AMMORESIVDCRNIA1 | Motif (IVD) found in the Chlamydomonas Nia1 gene promoter; Located between -51 and -42; Involved in Nia1 transcription repression | | 52.43% |
Matrix_177 | ADOF2 | Not Available | | 52.37% |
Matrix_137 | SPL1; SPL12 | Not Available | | 52.35% |
Matrix_436 | AT3G49930; AZF1 | Not Available | | 52.24% |
Matrix_437 | MYC2 | Not Available | | 51.93% |
Motif_310 | ANAERO3CONSENSUS | One of 16 motifs found in silico in promoters of 13 anaerobic genes involved in the fermentative pathway (anaerobic set 1); Arbitrary named ANAERO3CONSENSUS by the PLACEdb curator | | 51.82% |
Motif_193 | GLK1 | GLK transcription factors coordinate expression of the photosynthetic apparatus in Arabidopsis | | 51.00% |
Motif_692 | MYB80 | The MYB80 transcription factor is required for pollen development and the regulation of tapetal programmed cell death in Arabidopsis thaliana | | 50.50% |
Motif_606 | NAPINMOTIFBN | Sequence found in 5' upstream region (-6, -95, -188) of napin (2S albumin) gene in Brassica napus; Interact with a protein present in crude nuclear extracts from developing B. napus seeds | | 50.48% |
Matrix_233 | MYC3 | Not Available | | 50.30% |
Matrix_78 | AT3G45610 | Not Available | | 50.07% |