PLAZA 3.0 Dicots : Binding Sites

Binding sites with simlar sequences

Binding site: Matrix_256
Name: IXR11; KNAT5; KNAT4; KNAT3
Description: Not Available

Positional Weight Matrix

Minimum similarity percentage

Binding site	Name	Description	Similarity
Matrix_418	KNAT6; KNAT2	Not Available	94.88%
Matrix_188	SPL4	Not Available	76.34%
Matrix_3	WRKY48	Not Available	75.78%
Matrix_226	GATA1	Not Available	75.55%
Matrix_101	ERF5	Not Available	75.26%
Matrix_75	WRKY29	Not Available	75.00%
Matrix_17	WRKY22	Not Available	74.82%
Matrix_80	BIM1	Not Available	74.65%
Matrix_263	WRKY33; WRKY19; WRKY32	Not Available	74.59%
Matrix_231	HDG2; HDG3; ATML1; HB-7	Not Available	74.00%
Matrix_370	WRKY50; WRKY51	Not Available	73.20%
Matrix_286	GATA7	Not Available	73.08%
Matrix_195	GATA2; GATA4	Not Available	73.06%
Matrix_489	RAV1	Not Available	72.74%
Matrix_206	CUC1; ANAC100	Not Available	72.64%
Matrix_283	GATA15; GATA17; AT4G16141; GATA22; GATA23; GATA16; GNC	Not Available	72.46%
Matrix_287	ERF2	Not Available	72.37%
Matrix_463	HAT3.1	Not Available	72.36%
Matrix_384	ATWRKY17	Not Available	71.73%
Matrix_312	ARF11; MP; ARF6; IAA21; ARF8; ARF4	Not Available	71.33%
Matrix_227	AT1G64620	Not Available	70.64%
Matrix_102	WRKY21	Not Available	70.42%
Matrix_37	GATA27	Not Available	70.14%
Matrix_415	WRKY27	Not Available	70.08%
Matrix_109	GBF3	Not Available	70.03%
Matrix_328	AT1G76580	Not Available	69.84%
Matrix_181	Dof5.7	Not Available	69.76%
Matrix_408	GATA12	Not Available	69.71%
Matrix_209	RAP2.6	Not Available	69.69%
Matrix_165	KNAT1	Not Available	69.65%
Matrix_12	EIN3; EIL2	Not Available	69.52%
Matrix_207	WRKY10; WRKY57; AT2G44745; ATWRKY13; WRKY49	Not Available	69.27%
Matrix_308	INO	Not Available	69.19%
Matrix_221	SPL7	Not Available	68.90%
Matrix_271	AT3G16350	Not Available	68.89%
Matrix_507	TCP3	Not Available	68.70%
Matrix_41	anac058	Not Available	68.67%
Matrix_423	AT3G04030	Not Available	68.48%
Matrix_59	AT4G00238; AT4G00250	Not Available	68.40%
Matrix_280	TCP24; TCP1; BRC2; ATTCP18	Not Available	68.38%
Matrix_99	DOF4.7	Not Available	68.36%
Matrix_307	RGL2; RGL3	Not Available	68.27%
Matrix_508	APL; AT3G12730; AT3G24120; UNE16	Not Available	68.26%
Matrix_333	GATA3	Not Available	67.90%
Matrix_197	NAP	Not Available	67.63%
Matrix_491	AT1G68670; AT3G25790	Not Available	67.58%
Matrix_331	GBF1	Not Available	67.54%
Matrix_230	ARR11	Not Available	67.39%
Matrix_502	AT3G13040	Not Available	67.38%
Matrix_69	AT2G03500	Not Available	67.37%
Matrix_259	AT1G50680; AT1G51120	Not Available	67.34%
Matrix_317	AT1G06070; AT2G31370; AT2G40620	Not Available	66.71%
Matrix_296	GBF2	Not Available	66.65%
Matrix_268	EMB2749; VND5; SMB; VND1; ANAC076; NAC101; ANAC105	Not Available	66.51%
Matrix_85	SPL5	Not Available	66.49%
Matrix_374	AT5G07580; AT5G61590	Not Available	66.49%
Matrix_220	WRKY18	Not Available	66.44%
Matrix_70	GATA26	Not Available	66.42%
Matrix_142	ZFP8	Not Available	66.40%
Matrix_84	AtGRF6	Not Available	66.32%
Matrix_350	ARR14	Not Available	66.17%
Matrix_141	AT3G25990	Not Available	66.06%
Matrix_416	ASL5	Not Available	65.69%
Matrix_91	CRF3	Not Available	65.56%
Matrix_151	ASIL1	Not Available	65.50%
Matrix_505	GATA8	Not Available	65.45%
Matrix_203	GATA9; GATA12	Not Available	65.40%
Matrix_78	AT3G45610	Not Available	65.32%
Matrix_137	SPL1; SPL12	Not Available	65.30%
Matrix_300	bZIP68; bZIP16	Not Available	65.26%
Matrix_450	SPL7	Not Available	65.25%
Matrix_343	AT2G33710	Not Available	65.25%
Matrix_202	WRKY71; WRKY28; WRKY8	Not Available	65.22%
Matrix_44	CUC3; anac046; NAC3; ANAC087; ATNAC6; CUC2	Not Available	65.17%
Matrix_336	AT5G08520	Not Available	65.14%
Matrix_261	ATERF-1	Not Available	65.14%
Matrix_241	HB-1; AT5G44180	Not Available	65.06%
Matrix_162	AtPHR1	Not Available	64.99%
Matrix_143	GATA14; GATA6; GATA5	Not Available	64.88%
Matrix_493	AT1G22985; AT1G71130	Not Available	64.83%
Matrix_171	LBD3; LBD4	Not Available	64.78%
Matrix_361	AT1G25550	Not Available	64.76%
Matrix_248	ZFP5	Not Available	64.73%
Matrix_380	ATMYR1	Not Available	64.66%
Matrix_190	ATERF1	Not Available	64.64%
Matrix_199	AT1G69170; SPL9; SPL15; SPL13A; SPL13B	Not Available	64.52%
Matrix_434	ARR11	Not Available	64.05%
Matrix_53	MYC3	Not Available	63.99%
Matrix_14	ZCW32; AT5G62610	Not Available	63.81%
Matrix_16	AT3G04450; PHL1	Not Available	63.78%
Matrix_122	ABF1; AREB2	Not Available	63.67%
Matrix_274	EDF3	Not Available	63.67%
Matrix_515	ddf2; ATCBF3; CBF1; CBF4	Not Available	63.66%
Matrix_284	KAN2; KAN3; KAN; KAN4	Not Available	63.39%
Matrix_177	ADOF2	Not Available	63.34%
Matrix_120	BEE2	Not Available	63.30%
Matrix_322	NST3; ANAC015; BRN2	Not Available	63.30%
Matrix_204	WOX13	Not Available	63.21%
Motif_497	ARE1	ARE (antioxidant response element); antioxidant response element of rat glutathione S-transferase Ya subunit, and rat NAD(P)H:quinone reductase genes	63.19%
Matrix_243	RAP2.12; RAP2.2	Not Available	62.79%
Matrix_106	AT5G47390	Not Available	62.72%
Matrix_324	AT2G01060	Not Available	62.59%
Matrix_38	SPL14	Not Available	62.50%
Matrix_182	ATHB6	Not Available	62.48%
Matrix_234	RAP2.3	Not Available	62.04%
Matrix_58	WRKY55; ATWRKY54; WRKY46; WRKY70; AtWRKY41; WRKY53; WRKY30	Not Available	61.93%
Matrix_334	AT3G23230	Not Available	61.83%
Matrix_470	WRKY18	Not Available	61.77%
Matrix_33	SPL11; SPL10; SPL2	Not Available	61.75%
Matrix_285	DDF1	Not Available	61.72%
Matrix_152	EIL1; AT5G65100	Not Available	61.71%
Matrix_411	DOF5.6	Not Available	61.67%
Matrix_457	TGA2	Not Available	61.66%
Matrix_46	AT4G21895	Not Available	61.51%
Matrix_377	AT1G75490; DREB2C; AT2G40350; AT5G18450	Not Available	61.35%
Matrix_97	APRR2	Not Available	61.22%
Matrix_72	CDF2	Not Available	61.10%
Matrix_327	ARR11	Not Available	60.88%
Matrix_465	MYC4	Not Available	60.81%
Matrix_323	BIM3	Not Available	60.77%
Matrix_144	AT5G08330; AT5G23280	Not Available	60.69%
Matrix_389	ILR3	Not Available	60.50%
Matrix_341	HMGA	Not Available	60.40%
Matrix_330	MYC2; TT8	Not Available	60.38%
Matrix_404	OBP4	Not Available	60.35%
Matrix_146	ORA47	Not Available	60.30%
Matrix_321	HRD	Not Available	60.29%
Matrix_158	AT1G03040; LRL1; UNE12; LRL2; LRL3	Not Available	60.23%
Matrix_201	AT1G74840	Not Available	60.23%
Matrix_87	AT1G19000	Not Available	59.87%
Matrix_156	POC1	Not Available	59.84%
Matrix_447	RVE1	Not Available	59.75%
Matrix_469	NAC041; NAC083	Not Available	59.70%
Matrix_425	TIFY2A	Not Available	59.61%
Matrix_504	WRKY40	Not Available	59.44%
Matrix_174	ZAT2	Not Available	59.40%
Matrix_210	ARR1	Not Available	59.40%
Matrix_212	ATHB-12	Not Available	59.39%
Matrix_472	ZN_C2_H2	Not Available	59.34%
Matrix_40	TCP2	Not Available	59.27%
Matrix_449	BIM2	Not Available	59.24%
Matrix_4	ARR14	Not Available	59.12%
Matrix_200	PIL5; AT4G28790; AT4G28800; AT4G28811; AT4G28815	Not Available	59.01%
Matrix_475	AT5G64220	Not Available	59.00%
Matrix_169	E2F1	Not Available	58.99%
Matrix_254	MYB52	Not Available	58.99%
Matrix_399	TGA1	Not Available	58.80%
Matrix_272	DEAR4	Not Available	58.73%
Matrix_26	ATMYB3; MYB24	Not Available	58.49%
Matrix_129	ABF1	Not Available	58.46%
Matrix_494	OBP4	Not Available	58.38%
Matrix_155	RAP2.6; ERF110; ABR1	Not Available	58.27%
Matrix_378	ATERF1	Not Available	58.09%
Matrix_512	HAT3	Not Available	58.00%
Matrix_6	AT1G70000	Not Available	57.99%
Matrix_249	WRKY11	Not Available	57.95%
Motif_347	OPAQUE2ZMB32	opaque-2 binding site of maize b-32 (type I ribosome-inactivating protein gene); O2; O2S; O2S and GARE form a gibberellin response complex (GARC)	57.89%
Matrix_500	WRKY43	Not Available	57.85%
Matrix_275	ZAP1	Characterization of a zinc-dependent transcriptional activator from Arabidopsis	57.78%
Matrix_316	WRKY15; WRKY39; WRKY7; WRKY74	Not Available	57.78%
Matrix_148	WRKY60	Not Available	57.76%
Motif_443	KN1; BP	The knotted1-like homeobox gene BREVIPEDICELLUS regulates cell differentiation by modulating metabolic pathways. Selective interaction of plant homeodomain proteins mediates high DNA-binding affinity	57.75%
Matrix_406	ATERF-7	Not Available	57.53%
Matrix_56	BZIP17; BZIP28; BZIP49	Not Available	57.45%
Matrix_351	HAT9; ATHB-4; ATHB2; HAT22; HAT14	Not Available	57.39%
Matrix_313	ATMYB65; MYB33	Not Available	57.35%
Matrix_348	AT5G51910	Not Available	57.34%
Matrix_431	ATHB21; HB-3	Not Available	57.24%
Matrix_521	AHL20	Not Available	57.19%
Matrix_282	bZIP60	Not Available	57.18%
Matrix_501	DAG2	Not Available	56.90%
Matrix_326	AT5G07310; Rap2.6L; AT5G61890	Not Available	56.87%
Matrix_266	TCP16	Determinants of the DNA binding specificity of class I and class II TCP transcription factors	56.81%
Matrix_196	TCP20; AT5G41030	Not Available	56.80%
Matrix_93	YAB5	Not Available	56.78%
Matrix_366	ARR14	Not Available	56.77%
Motif_648	ARE2	ARE (antioxidant response element); antioxidant response element of mouse metallothionein-I (MT-I) gene; Consensus sequence of mouse MT-I and MT-II genes, and MT genes isolated from rat, hamster, human, sheep, chicken, Drosophila melanogaster, C. elegans; See ARE1	56.74%
Matrix_100	AT1G48610	Not Available	56.69%
Matrix_354	AHL12	Not Available	56.69%
Matrix_311	TGA1	Not Available	56.63%
Matrix_382	AT3G04850	Not Available	56.61%
Matrix_185	AHL25	Not Available	56.56%
Matrix_161	MYBC1; AT3G10760; LUX; AT5G05090; AT5G59570	Not Available	56.56%
Matrix_255	cdf3	Not Available	56.55%
Matrix_357	WRKY61; WRKY6; WRKY9; WRKY36; WRKY47; WRKY42; WRKY31; WRKY72	Not Available	56.50%
Matrix_314	WRKY65; WRKY14; WRKY35; WRKY69; WRKY16; ATWRKY52	Not Available	56.47%
Matrix_424	MYB59	Not Available	56.39%
Matrix_290	AP2	Not Available	56.23%
Matrix_42	AT2G45680	Not Available	56.21%
Matrix_473	RRTF1	Not Available	56.18%
Matrix_35	YAB5; YAB3	Not Available	56.14%
Matrix_373	E2FE	Not Available	56.12%
Matrix_31	SPL1	Not Available	56.06%
Matrix_379	RHL41	Not Available	56.05%
Matrix_420	ANAC58	Not Available	56.04%
Matrix_518	AT2G21230	Not Available	56.03%
Matrix_52	ZAT18	Not Available	55.99%
Matrix_279	HRS1	Not Available	55.94%
Matrix_110	ATABI4; AT3G57600	Not Available	55.78%
Matrix_392	ARR2	Not Available	55.76%
Matrix_228	TGA2	Not Available	55.60%
Matrix_258	WOX13	Not Available	55.56%
Matrix_503	AT2G37430; AT3G53600	Not Available	55.51%
Matrix_239	AT5G04390	Not Available	55.47%
Matrix_114	EPR1; AT3G10113	Not Available	55.43%
Matrix_273	ANAC55	Not Available	55.36%
Matrix_440	LFY	Not Available	55.32%
Matrix_257	NAC050; ANAC051; anac057; NAC2	Not Available	55.16%
Matrix_452	MYB46	Not Available	55.13%
Matrix_157	LHY; RVE2	Not Available	55.10%
Matrix_355	ERF10; ERF11	Not Available	55.07%
Matrix_511	AT1G05805; AT1G35460; AT1G51140; AT2G42280; AT2G43140; AT4G09180	Not Available	55.01%
Matrix_198	STZ; C2H2; AZF3	Not Available	54.98%
Matrix_126	RBE	Not Available	54.97%
Matrix_480	BES1	Not Available	54.97%
Matrix_462	ATERF-8	Not Available	54.96%
Matrix_218	TIFY2B; TIFY1	Not Available	54.94%
Matrix_306	TGA1	TGA1 and G-box binding factors: two distinct classes of Arabidopsis leucine zipper proteins compete for the G-box-like element TGACGTGG	54.94%
Matrix_427	ZAT14	Not Available	54.82%
Matrix_8	KAN1	Not Available	54.77%
Matrix_499	ARR18	Not Available	54.71%
Matrix_154	AT1G22190; AT1G36060; AT1G64380; RAP2.4; AT2G20880; AT2G22200; AT4G13620; AT4G28140; AT4G39780; AT5G65130	Not Available	54.67%
Matrix_23	ANAC46	Not Available	54.54%
Matrix_519	ATDOF2.4	Not Available	54.51%
Matrix_168	AHL25	Not Available	54.46%
Matrix_131	HDG12; EDT1; GL2; HDG8	Not Available	54.39%
Matrix_436	AT3G49930; AZF1	Not Available	54.24%
Matrix_125	AHL12	Not Available	54.19%
Matrix_453	EIL3	Not Available	54.16%
Matrix_446	LBD16	Not Available	54.11%
Matrix_252	RAP2.6	Not Available	54.03%
Matrix_405	DREB2C	Not Available	53.98%
Matrix_421	GLK1	Not Available	53.87%
Matrix_128	TGA2	Not Available	53.75%
Matrix_233	MYC3	Not Available	53.73%
Matrix_57	WIN1; SHN3; SHN2	Not Available	53.70%
Matrix_393	REM1	Not Available	53.66%
Matrix_362	DEAR3	Not Available	53.62%
Matrix_337	MYB46	Not Available	53.61%
Matrix_36	RAV1_1	RAV1, a novel DNA-binding protein, binds to bipartite recognition sequence through two distinct DNA-binding domains uniquely found in higher plants	53.53%
Matrix_315	MYB111	Not Available	53.51%
Matrix_487	AT1G29160	Not Available	53.50%
Matrix_444	AT1G19485; AT4G17950	Not Available	53.48%
Matrix_164	AT1G02030; AT2G45120; AZF2; AT3G60580	Not Available	53.46%
Matrix_175	Dof5.7	Not Available	53.39%
Motif_378	WRKY6	Targets of AtWRKY6 regulation during plant senescence and pathogen defense	53.37%
Matrix_276	AT1G01520; AT3G09600; AT4G01280; LCL1; AT5G52660	Not Available	53.33%
Matrix_180	SPL1	Not Available	53.30%
Matrix_50	ATERF14; AT5G43410	Not Available	53.19%
Matrix_96	TMO6	Not Available	53.14%
Matrix_397	GT2L	Not Available	53.08%
Matrix_112	TBP2; TFIID-1	Not Available	52.96%
Matrix_67	GLK1	Not Available	52.96%
Matrix_166	TGA4	Not Available	52.87%
Matrix_352	LEC2	Not Available	52.78%
Matrix_302	HAT1; HAT2	Not Available	52.76%
Matrix_225	MYB52	Not Available	52.76%
Matrix_506	DRNL; ATERF-4	Not Available	52.60%
Matrix_344	ATERF15; AT4G18450	Not Available	52.58%
Matrix_433	ATERF1	Not Available	52.23%
Matrix_409	DEAR3	Not Available	52.06%
Matrix_520	ARR14	Not Available	52.04%
Matrix_347	WOX14; WOX10	Not Available	51.93%
Matrix_32	AHL25	Not Available	51.83%
Matrix_236	CCA1	Not Available	51.78%
Matrix_22	BES1	A brassinosteroid transcriptional network revealed by genome-wide identification of BESI target genes in Arabidopsis thaliana	51.71%
Matrix_454	AT1G77200; ATERF38; AT4G16750; AT5G52020	Not Available	51.71%
Matrix_71	ATHB7	Not Available	51.66%
Matrix_292	FTQ4	Not Available	51.61%
Matrix_216	TCP16	Not Available	51.60%
Matrix_88	AHL12	Not Available	51.48%
Matrix_25	AP3	Not Available	51.46%
Motif_256	RHE_element	Functional Conservation of a Root Hair Cell-Specific cis-Element in Angiosperms with Different Root Hair Distribution Patterns	51.43%
Matrix_437	MYC2	Not Available	51.31%
Matrix_516	ANAC038; ANAC079	Not Available	51.30%
Matrix_281	TCP13	Not Available	51.28%
Matrix_104	PI	Not Available	51.21%
Matrix_476	bHLH115; bHLH34	Not Available	51.17%
Matrix_395	AT1G19210; ORA47; AT4G31060; AT5G21960	Not Available	51.16%
Matrix_208	AP1	Not Available	51.09%
Matrix_55	PIF3	Not Available	51.08%
Matrix_432	AT1G77920	Not Available	51.07%
Motif_371	DRE-like promoter motif	The Expression Profile Matrix of Arabidopsis Transcription Factor Genes Suggests Their Putative Functions in Response to Environmental Stresses	51.05%
Matrix_10	STY1	Not Available	51.04%
Motif_546	AtWER	Regulation of CAPRICE transcription by MYB proteins for root epidermis differentiation in Arabidopsis	51.03%
Matrix_116	ANAC55	Not Available	51.01%
Matrix_391	AHL20	Not Available	50.95%
Matrix_319	TEM1	Not Available	50.91%
Matrix_438	AtbZIP63	Not Available	50.89%
Matrix_461	ATHB12	Not Available	50.81%
Motif_512	GLMHVCHORD	GLM (GCN4-like motif) found in the promoter of barley B1- and c-hordein gene; Involved in the nitrogen response of c-hordein promoter; SPA, a seed-specific basic leucine zipper protein from wheat, can activate transcription from the GCN4-like motif (GLM) of -326 LMWG-1D1 promoter	50.72%
Matrix_398	TBP2; ATTRB2	Not Available	50.64%
Matrix_86	CRF5; CRF6; CRF4	Not Available	50.50%
Matrix_260	CAMTA3	Not Available	50.44%
Motif_464	ARR1; ARR2	Arabidopsis ARR1 and ARR2 response regulators operate as transcriptional activators	50.41%
Matrix_471	KAN4	Not Available	50.37%
Matrix_325	WRKY4; WRKY3; WRKY58; ATWRKY34; WRKY20; ATWRKY2	Not Available	50.37%
Matrix_498	AT2G28710; AT3G46070; AT3G46080; ZAT7	Not Available	50.32%
Matrix_332	SPT; ALC	Not Available	50.31%
Matrix_229	CDC5	A cdc5+ homolog of a higher plant, Arabidopsis thaliana	50.03%