Matrix_48 | PI | Not Available | | 73.24% |
Matrix_439 | AP3 | Not Available | | 71.77% |
Motif_69 | CTRMCAMV35S | CT-rich motif (inverted GAGA) found in a 60-nucleotide region (S1) downstream of the transcription start site of the CaMV 35S RNA; Can enhance gene expression; Inverted GAGA | | 69.38% |
Matrix_269 | FHY3/FAR1 | Not Available | | 68.10% |
Matrix_115 | AGL15 | Not Available | | 64.06% |
Matrix_6 | AT1G70000 | Not Available | | 62.98% |
Matrix_106 | AT5G47390 | Not Available | | 61.92% |
Matrix_9 | AT5G04760 | Not Available | | 61.65% |
Motif_668 | TCA1MOTIF | TCA-1 (tobacco nuclear protein 1) binding site; Related to salicylic acid-inducible expression of many genes; Found in barley beta-1,3-glucanase and over 30 different plant genes which are known to be induced by one or more forms of stress; A similar sequence (TCATTTCTT) was found in tobacco Tnt1 retrotransposon promoter | | 60.09% |
Matrix_298 | RAV1 | Not Available | | 59.13% |
Matrix_413 | RAV1 | Not Available | | 59.13% |
Matrix_183 | BES1 | A brassinosteroid transcriptional network revealed by genome-wide identification of BESI target genes in Arabidopsis thaliana | | 58.71% |
Matrix_29 | AP1 | Not Available | | 58.58% |
Matrix_51 | LFY | Not Available | | 57.91% |
Matrix_271 | AT3G16350 | Not Available | | 57.81% |
Motif_290 | CCTCGTGTCTCGMGH3 | Sequence found in D1 element in Soybean GH3 gene promoter; Showed constitutive activity with TGTCTC element; Confers auxin inducibility; Binding site of nuclear protein | | 57.78% |
Matrix_172 | BES1 | A brassinosteroid transcriptional network revealed by genome-wide identification of BESI target genes in Arabidopsis thaliana | | 57.78% |
Motif_654 | DR5GMGH3 | DR5; A highly active synthetic auxin response element; Created by site-directed mutations in a natural composite AuxRE found in the soybean GH3 promoter; The DR5 showed greater auxin responsiveness; Binding site of ARF1 | | 57.22% |
Matrix_523 | FUSCA3 | Not Available | | 56.97% |
Motif_372 | E2FAT | E2F-binding site found in many potential E2F target genes; most potential E2F targets identified in silico show a cell cycle-regulated expression | | 56.69% |
Matrix_205 | AGL15 | Not Available | | 56.69% |
Matrix_215 | ARF1 | ARF1, a transcription factor that binds to auxin response elements | | 56.66% |
Matrix_224 | ERF1 | Not Available | | 56.64% |
Matrix_392 | ARR2 | Not Available | | 55.78% |
Motif_13 | E2F-varient binding site motif | A genome-wide identification of E2F-regulated genes in Arabidopsis | | 55.46% |
Motif_681 | TDBA12NTCHN50 | TDBA12 binding site found in tobacco basic class I chitinase gene (CHN50); Elicitor response element; TDBA12 belongs to WRKY proteins that appear to be unique to plants; TDBA12 is activated by TMV infection in resistant tobacco plant and by plant defense signal molecule SA | | 55.43% |
Matrix_479 | TOE1 | Not Available | | 55.23% |
Matrix_161 | MYBC1; AT3G10760; LUX; AT5G05090; AT5G59570 | Not Available | | 55.23% |
Matrix_50 | ATERF14; AT5G43410 | Not Available | | 55.11% |
Matrix_399 | TGA1 | Not Available | | 54.80% |
Motif_406 | ABREBZMRAB28 | ABA-responsive element (ABRE B) found at -105 to -96 in maize rab28; Maize rab28 is ABA-inducible in embryos and vegetative tissues | | 54.28% |
Matrix_409 | DEAR3 | Not Available | | 54.15% |
Matrix_454 | AT1G77200; ATERF38; AT4G16750; AT5G52020 | Not Available | | 54.15% |
Matrix_456 | bZIP60 | Not Available | | 54.09% |
Matrix_257 | NAC050; ANAC051; anac057; NAC2 | Not Available | | 53.98% |
Motif_330 | ANAERO5CONSENSUS | One of 16 motifs found in silico in promoters of 13 anaerobic genes involved in the fermentative pathway (anaerobic set 1); Arbitrary named ANAERO5CONSENSUS by the PLACEdb curator | | 53.88% |
Matrix_430 | TOE2 | Not Available | | 53.84% |
Matrix_471 | KAN4 | Not Available | | 53.67% |
Matrix_196 | TCP20; AT5G41030 | Not Available | | 53.66% |
Matrix_4 | ARR14 | Not Available | | 53.33% |
Matrix_499 | ARR18 | Not Available | | 53.20% |
Matrix_34 | RAV1_2 | RAV1, a novel DNA-binding protein, binds to bipartite recognition sequence through two distinct DNA-binding domains uniquely found in higher plants | | 53.06% |
Matrix_477 | RAV1 | Not Available | | 53.06% |
Matrix_467 | RAV1 | Not Available | | 53.06% |
Matrix_489 | RAV1 | Not Available | | 53.06% |
Matrix_203 | GATA9; GATA12 | Not Available | | 52.64% |
Matrix_210 | ARR1 | Not Available | | 52.60% |
Matrix_288 | RAP2.3 | Not Available | | 52.45% |
Matrix_363 | RAP2.3 | Not Available | | 52.39% |
Matrix_186 | FHY3 | Not Available | | 52.37% |
Motif_107 | O2F2BE2S1 | opaque-2 recognition site F2 in Bertholletia excelsa (Brazil nut tree) 2S storage protein gene (be2S1); O2 protein binds to F1, F2 and F3 sequences of be2S1 promoter; F2 is a new O2-binding sequence related to the O2 target sites of the Coix alpha-coxin, the maize b-32 genes and the AP-1 pseudopalindrome | | 52.24% |
Matrix_393 | REM1 | Not Available | | 52.21% |
Matrix_311 | TGA1 | Not Available | | 52.10% |
Matrix_56 | BZIP17; BZIP28; BZIP49 | Not Available | | 52.10% |
Matrix_498 | AT2G28710; AT3G46070; AT3G46080; ZAT7 | Not Available | | 52.03% |
Matrix_434 | ARR11 | Not Available | | 51.81% |
Motif_216 | PYRIMIDINEBOXHVEPB1 | Pyrimidine box found in the barley EPB-1 (cysteine proteinase) gene promoter; Located between -120 to -113; Required for GA induction | | 51.81% |
Matrix_480 | BES1 | Not Available | | 51.74% |
Matrix_336 | AT5G08520 | Not Available | | 51.73% |
Matrix_258 | WOX13 | Not Available | | 51.71% |
Motif_555 | ABRECE3ZMRAB28 | CE3 (coupling element 3) in maize rab28 gene promoter; ABA responsive element; stress response; Similar (10 of 12) to CE3 in A1 gene of barley; See ABRECE3HVA1; Found at -126 to -115 | | 51.62% |
Matrix_122 | ABF1; AREB2 | Not Available | | 51.60% |
Matrix_206 | CUC1; ANAC100 | Not Available | | 51.58% |
Matrix_128 | TGA2 | Not Available | | 51.47% |
Matrix_167 | ZAT6 | Not Available | | 51.45% |
Motif_631 | MARARS | ARS element; Motif found in SAR (MAR) | | 51.43% |
Matrix_419 | TGA9; PAN; TGA6; bZIP65 | Not Available | | 51.42% |
Motif_663 | E2F binding site motif; E2F/DP BS in AtCDC6 | Not Available | | 51.38% |
Matrix_39 | AP1 | Not Available | | 51.34% |
Matrix_57 | WIN1; SHN3; SHN2 | Not Available | | 51.32% |
Matrix_1 | TOE2 | Not Available | | 51.30% |
Matrix_169 | E2F1 | Not Available | | 51.29% |
Matrix_447 | RVE1 | Not Available | | 51.24% |
Matrix_237 | MYB55 | Not Available | | 51.23% |
Matrix_422 | TOE1 | Not Available | | 51.13% |
Matrix_166 | TGA4 | Not Available | | 51.12% |
Motif_629 | L1DCPAL1 | L1 element, found in PAL1 promoter in carrot (Daucus carota), is a protoplastization (dilution) responsive element; L1 contains Box L-like sequence (ACCTACCC); see also BOXL CORE of DC PAL1 | | 51.10% |
Motif_431 | E2Fb | Arabidopsis E2F1 binds a sequence present in the promoter of S-phase-regulated gene AtCDC6 and is a member of a multigene family with differential activities | | 51.08% |
Matrix_268 | EMB2749; VND5; SMB; VND1; ANAC076; NAC101; ANAC105 | Not Available | | 51.06% |
Motif_273 | ABRECE3HVA1 | CE3 (coupling element 3) of ABRC3 in barley HVA1 gene; ABRC3 (ABA response complex 3) of HVA1 consists of CE3 and A2; ABA responsive element; stress response; Found in barley HVA1 gene encoding a class 3 late embryogenesis-abundant (Lea) protein; ABRC1 OF HVA22 consists of CE1 and A3 | | 50.97% |
Matrix_438 | AtbZIP63 | Not Available | | 50.94% |
Matrix_432 | AT1G77920 | Not Available | | 50.89% |
Matrix_230 | ARR11 | Not Available | | 50.79% |
Matrix_146 | ORA47 | Not Available | | 50.77% |
Matrix_83 | PRR5 | Not Available | | 50.74% |
Motif_424 | GATA-1 | Arabidopsis thaliana GATA factors: organisation, expression and DNA-binding characteristics | | 50.72% |
Matrix_431 | ATHB21; HB-3 | Not Available | | 50.71% |
Matrix_41 | anac058 | Not Available | | 50.57% |
Matrix_80 | BIM1 | Not Available | | 50.54% |
Matrix_8 | KAN1 | Not Available | | 50.52% |
Matrix_408 | GATA12 | Not Available | | 50.50% |
Matrix_173 | ZAP1 | Not Available | | 50.48% |
Matrix_326 | AT5G07310; Rap2.6L; AT5G61890 | Not Available | | 50.43% |
Motif_644 | ABREDISTBBNNAPA | dist B (distal portion of B-box) found in napA gene of Brassica napus; Shows similarity to ABRE; Found between -148 and -124; Required for seed specific expression and ABA responsiveness;dist B ABRE mediated transactivation by ABI3 adn ABI3-dependent response to ABA; a tetramer of the composite RY/G complex mediated only ABA-independent transactivation by ABI3; B2 domain of ABI3 is necessary for ABA-independent and ABA-dependent activation through the dist B ABRE | | 50.41% |
Matrix_511 | AT1G05805; AT1G35460; AT1G51140; AT2G42280; AT2G43140; AT4G09180 | Not Available | | 50.34% |
Motif_687 | AtWER | Regulation of CAPRICE transcription by MYB proteins for root epidermis differentiation in Arabidopsis | | 50.33% |
Matrix_157 | LHY; RVE2 | Not Available | | 50.32% |
Matrix_61 | ATCBF3 | Not Available | | 50.31% |
Matrix_378 | ATERF1 | Not Available | | 50.15% |
Matrix_192 | FHY3/FAR1 | Not Available | | 50.15% |
Matrix_355 | ERF10; ERF11 | Not Available | | 50.11% |
Matrix_97 | APRR2 | Not Available | | 50.09% |
Matrix_77 | PRR5 | Not Available | | 50.02% |