PLAZA 3.0 Dicots : Binding Sites

Binding sites with simlar sequences

Binding site: Matrix_189
Name: WRI1
Description: An AP2-type transcription factor, WRINKLED1, of Arabidopsis thaliana binds to the AW-box sequence conserved among proximal upstream regions of genes involved in fatty acid synthesis

Positional Weight Matrix

Minimum similarity percentage

Binding site	Name	Description	Similarity
Motif_346	SND1; VND6; VND7; NST1; NST2	Global analysis of direct targets of secondary wall NAC master switches in Arabidopsis	60.98%
Matrix_105	SPL14	Not Available	55.75%
Matrix_358	AGL15	Binding site selection for the plant MADS domain protein AGL15: an in vitro and in vivo study	55.26%
Matrix_191	PIF5	Phytochrome interacting factors 4 and 5 control seedling growth in changing light conditions by directly controlling auxin signaling	54.59%
Matrix_107	AtSPL3	Not Available	54.06%
Matrix_428	SEP4	Not Available	53.82%
Matrix_2	SEP4	Not Available	53.48%
Matrix_417	SEP4	Not Available	53.48%
Matrix_310	AGL3	The Arabidopsis MADS-box gene AGL3 is widely expressed and encodes a sequence-specific DNA-binding protein	53.48%
Matrix_30	AtSPL8	Functional dissection of the plant-specific SBP-domain: overlap of the DNA-binding and nuclear localization domains	52.82%
Matrix_28	SEP1	Not Available	52.70%
Matrix_222	AGL2	DNA binding properties of two Arabidopsis MADS domain proteins: binding consensus and dimer formation	52.70%
Matrix_267	FLM; FLC; MAF2; FCL3; AGL69; AGL68	Not Available	52.43%
Matrix_304	AtSPL3	Functional dissection of the plant-specific SBP-domain: overlap of the DNA-binding and nuclear localization domains	51.85%
Motif_532	ANAC059	ORS1, an H2O2-Responsive NAC Transcription Factor, Controls Senescence in Arabidopsis thaliana	51.53%
Matrix_342	SPL14	Identification of a Consensus DNA-Binding Site for the Arabidopsis thaliana SBP Domain Transcription Factor, AtSPL14, and Binding Kinetics by Surface Plasmon Resonance	51.50%
Matrix_375	AtSPL8	Not Available	51.24%
Motif_156	HBOXPVCHS15	Binding site of two bean protein factors, KAP-1 and KAP-2; KAP-1 is a 97 kDa polypeptide; KAP-2 comprises two polypeptides of 76 kDa and 56 kDa; Elicitation of bean cell with glutathione causes a rapid increase in specific activities of KAP-1 and KAP2	51.06%
Matrix_488	ABF1	Not Available	50.91%
Matrix_250	ADAP; AT1G79700; WRI1; ANT	Not Available	50.81%
Matrix_459	ATHB9; CNA; PHB; ATHB-8; REV	Not Available	50.47%
Matrix_468	ATHB9	The Arabidopsis Athb-8, -9 and -14 genes are members of a small gene family coding for highly related HD-ZIP proteins	50.47%
Matrix_381	ATHB9	Not Available	50.47%
Matrix_43	AG	Not Available	50.24%
Matrix_445	AG	Not Available	50.24%
Matrix_98	AG	Isolation and characterization of the binding sequences for the product of the Arabidopsis floral homeotic gene AGAMOUS	50.24%
Matrix_386	AGL1	DNA binding properties of two Arabidopsis MADS domain proteins: binding consensus and dimer formation	50.15%
Matrix_121	SHP1	Not Available	50.15%