PLAZA 3.0 Dicots : Binding Sites

Binding sites with simlar sequences

Binding site: Matrix_15
Name: PIF3_1
Description: Direct targeting of light signals to a promoter element-bound transcription factor

Positional Weight Matrix

Minimum similarity percentage

Binding site	Name	Description	Similarity
Matrix_24	POC1	Not Available	100.00%
Matrix_345	POC1	Not Available	76.47%
Matrix_118	PIF3_2	Direct targeting of light signals to a promoter element-bound transcription factor	76.47%
Matrix_338	AP2	Not Available	72.63%
Matrix_194	HYH; HY5	Not Available	72.12%
Motif_504	LFY	Structural basis for LEAFY floral switch function and similarity with helix-turn-helix proteins	66.83%
Matrix_403	BZR1	Not Available	66.42%
Motif_635	LFY	Structural basis for LEAFY floral switch function and similarity with helix-turn-helix proteins	66.41%
Matrix_443	AGL15	Not Available	66.08%
Motif_686	LFY	Structural basis for LEAFY floral switch function and similarity with helix-turn-helix proteins	64.91%
Matrix_49	FHY3/FAR1	Not Available	64.70%
Motif_159	LFY	Structural basis for LEAFY floral switch function and similarity with helix-turn-helix proteins	64.49%
Motif_289	LFY	Structural basis for LEAFY floral switch function and similarity with helix-turn-helix proteins	63.53%
Matrix_191	PIF5	Phytochrome interacting factors 4 and 5 control seedling growth in changing light conditions by directly controlling auxin signaling	63.37%
Matrix_359	FLC	Not Available	63.25%
Motif_527	LFY	Structural basis for LEAFY floral switch function and similarity with helix-turn-helix proteins	63.11%
Matrix_214	AP1	Not Available	62.56%
Matrix_514	DYT1	Regulation of the Arabidopsis anther transcriptome by DYT1 for pollen development	61.93%
Matrix_356	PRR5	Not Available	60.12%
Matrix_342	SPL14	Identification of a Consensus DNA-Binding Site for the Arabidopsis thaliana SBP Domain Transcription Factor, AtSPL14, and Binding Kinetics by Surface Plasmon Resonance	59.16%
Matrix_301	PIL5	Not Available	58.64%
Matrix_77	PRR5	Not Available	58.44%
Matrix_264	ATAREB1	Not Available	58.25%
Matrix_369	AT2G18300	Not Available	58.17%
Matrix_105	SPL14	Not Available	58.00%
Matrix_251	PIF5	Phytochrome interacting factors 4 and 5 control seedling growth in changing light conditions by directly controlling auxin signaling	57.89%
Matrix_104	PI	Not Available	57.81%
Matrix_498	AT2G28710; AT3G46070; AT3G46080; ZAT7	Not Available	57.78%
Matrix_55	PIF3	Not Available	57.71%
Matrix_19	PIF5	Phytochrome interacting factors 4 and 5 control seedling growth in changing light conditions by directly controlling auxin signaling	57.32%
Matrix_108	PIF4	Interaction between BZR1 and PIF4 integrates brassinosteroid and environmental responses	56.96%
Matrix_305	PIF4	Interaction between BZR1 and PIF4 integrates brassinosteroid and environmental responses	56.50%
Matrix_153	AP2	Not Available	55.78%
Matrix_107	AtSPL3	Not Available	55.28%
Matrix_217	BES1	A brassinosteroid transcriptional network revealed by genome-wide identification of BESI target genes in Arabidopsis thaliana	55.16%
Matrix_304	AtSPL3	Functional dissection of the plant-specific SBP-domain: overlap of the DNA-binding and nuclear localization domains	54.94%
Matrix_466	PRR5	Not Available	54.55%
Matrix_438	AtbZIP63	Not Available	54.39%
Matrix_192	FHY3/FAR1	Not Available	53.92%
Matrix_467	RAV1	Not Available	53.76%
Matrix_477	RAV1	Not Available	53.76%
Matrix_34	RAV1_2	RAV1, a novel DNA-binding protein, binds to bipartite recognition sequence through two distinct DNA-binding domains uniquely found in higher plants	53.76%
Matrix_133	DYT1	Not Available	53.60%
Matrix_480	BES1	Not Available	53.35%
Matrix_459	ATHB9; CNA; PHB; ATHB-8; REV	Not Available	52.91%
Matrix_381	ATHB9	Not Available	52.91%
Matrix_468	ATHB9	The Arabidopsis Athb-8, -9 and -14 genes are members of a small gene family coding for highly related HD-ZIP proteins	52.91%
Matrix_278	AtbZIP44	Not Available	52.22%
Matrix_68	AtMYB77	More than 80 R2R3-MYB regulatory genes in the genome of Arabidopsis thaliana. Plant J 14: 273-84	51.80%
Matrix_47	AtMYB77	Not Available	51.80%
Matrix_123	FUSCA3	Not Available	51.44%
Motif_314	HY5AT	G box; Binding site of Arabidopsis bZIP protein HY5; HY5 is constitutively nuclear localized and is involved in light regulation of transcriptional activity of the promoters containing the G-box;HY5 abundance peaks in early seedling development, consistent with its role in promoting photomorphogenesis; HY5 stability and activity is regulated by phosphorylation in its COP1 binding domain; HY5 regulates stimulus-induced development of root and hypocotyl	51.29%
Motif_120	ABRETAEM	ABRE (ABA responsive element) found in wheat Em gene; transacting factor: EMBP-1; EMBP-1 binds to CACGTGGC	50.79%
Motif_664	C1GMAUX28	C1; DNase I protected sequence found in the soybean auxin responsive gene, Aux28, promoter; Located between -463 and -448; A/T-rich sequence	50.54%
Matrix_310	AGL3	The Arabidopsis MADS-box gene AGL3 is widely expressed and encodes a sequence-specific DNA-binding protein	50.49%
Matrix_2	SEP4	Not Available	50.49%
Matrix_417	SEP4	Not Available	50.49%
Matrix_375	AtSPL8	Not Available	50.43%
Matrix_121	SHP1	Not Available	50.29%
Matrix_386	AGL1	DNA binding properties of two Arabidopsis MADS domain proteins: binding consensus and dimer formation	50.29%
Matrix_257	NAC050; ANAC051; anac057; NAC2	Not Available	50.27%
Matrix_339	bHLH104	Not Available	50.24%