Expansion plot
Gene family finder
Ks-graphs
Skyline plot
Synteny plot
WGDotplot
Functional clusters
WGMapping
BLAST
WorkbenchGene families associated with a MapMan term
All gene family content is shown and individual cells refer to the target genes (per species).
MapMan term
Description MapMan term
amino acid metabolism.degradation.aromatic aa.tryptophan
#associated genes54
#associated gene families7
Click table-header(s) to enable sorting
| Gene family | #genes (in total) | #associated genes | species | ath | atr | cmi | gbi | gmo | osa | pab | pgl | pme | ppa | ppi | psi | psy | pta | ptr | tba |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| HOM03D000547 | 145 | 26 | 16 | 6 | 6 | 5 | 6 | 8 | 5 | 10 | 8 | 34 | 4 | 19 | 5 | 5 | 4 | 13 | 7 |
| HOM03D000857 | 103 | 11 | 16 | 3 | 4 | 3 | 8 | 3 | 2 | 6 | 5 | 5 | 2 | 6 | 3 | 7 | 38 | 4 | 4 |
| HOM03D003718 | 33 | 6 | 16 | 2 | 1 | 2 | 2 | 1 | 1 | 10 | 3 | 2 | 2 | 2 | 1 | 1 | 1 | 1 | 1 |
| HOM03D003457 | 35 | 4 | 16 | 1 | 1 | 1 | 1 | 3 | 1 | 1 | 1 | 12 | 2 | 5 | 1 | 1 | 1 | 2 | 1 |
| HOM03D004353 | 29 | 4 | 16 | 1 | 1 | 2 | 2 | 1 | 2 | 2 | 1 | 2 | 2 | 5 | 2 | 1 | 1 | 2 | 2 |
| HOM03D000344 | 202 | 2 | 16 | 5 | 2 | 9 | 5 | 9 | 5 | 17 | 14 | 39 | 5 | 33 | 9 | 8 | 32 | 7 | 3 |
| HOM03D005753 | 23 | 1 | 16 | 1 | 1 | 2 | 1 | 1 | 1 | 1 | 1 | 3 | 1 | 2 | 1 | 1 | 1 | 2 | 3 |
#genes (in total)
This is the number of genes in the entire gene family.
#associated genesThis is the number of genes that are part of the gene family, and also have the specified MapMan term. Naturaly, this number should be a subset of "#genes (in total)".