Expansion plot
Gene family finder
Ks-graphs
Skyline plot
Synteny plot
WGDotplot
Functional clusters
WGMapping
BLAST
WorkbenchGene families associated with a MapMan term
All gene family content is shown and individual cells refer to the target genes (per species).
MapMan term
Description MapMan term
amino acid metabolism.synthesis.aspartate family.methionine
#associated genes65
#associated gene families7
Click table-header(s) to enable sorting
| Gene family | #genes (in total) | #associated genes | species | ath | atr | cmi | gbi | gmo | osa | pab | pgl | pme | ppa | ppi | psi | psy | pta | ptr | tba |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| HOM03D000528 | 148 | 17 | 16 | 4 | 2 | 5 | 5 | 3 | 5 | 7 | 5 | 11 | 5 | 34 | 8 | 11 | 32 | 8 | 3 |
| HOM03D001396 | 73 | 16 | 16 | 3 | 2 | 2 | 3 | 8 | 8 | 8 | 4 | 7 | 3 | 8 | 4 | 3 | 4 | 3 | 3 |
| HOM03D000608 | 136 | 15 | 16 | 3 | 2 | 13 | 10 | 6 | 2 | 21 | 7 | 18 | 5 | 21 | 2 | 10 | 6 | 5 | 5 |
| HOM03D005920 | 23 | 8 | 15 | 2 | 0 | 1 | 1 | 1 | 1 | 2 | 1 | 1 | 3 | 4 | 1 | 1 | 1 | 2 | 1 |
| HOM03D002553 | 45 | 7 | 16 | 3 | 2 | 1 | 2 | 3 | 4 | 5 | 2 | 4 | 3 | 3 | 2 | 2 | 3 | 5 | 1 |
| HOM03D000663 | 123 | 1 | 16 | 8 | 5 | 2 | 9 | 1 | 6 | 8 | 4 | 14 | 1 | 4 | 6 | 7 | 34 | 13 | 1 |
| HOM03D004292 | 30 | 1 | 14 | 1 | 1 | 0 | 3 | 0 | 1 | 2 | 2 | 4 | 2 | 4 | 1 | 2 | 3 | 1 | 3 |
#genes (in total)
This is the number of genes in the entire gene family.
#associated genesThis is the number of genes that are part of the gene family, and also have the specified MapMan term. Naturaly, this number should be a subset of "#genes (in total)".