Child GO terms

Original GO term
GO:0016070
Description
RNA metabolic process
Type
BP

GO description genes species ath atr cmi gbi gmo osa pab pgl pme ppa ppi psi psy pta ptr tba
GO:0032774 RNA biosynthetic process 20530 16 3070 1086 426 500 480 1786 1214 690 1998 1426 1306 469 912 1926 2627 614
GO:0006351 transcription, DNA-templated 20489 16 3065 1084 423 497 478 1784 1211 688 1995 1423 1304 468 910 1921 2624 614
GO:0051252 regulation of RNA metabolic process 17755 16 2765 973 323 398 356 1642 1054 568 1615 1272 1025 389 775 1680 2443 477
GO:2001141 regulation of RNA biosynthetic process 17649 16 2750 963 322 395 355 1628 1052 561 1610 1260 1021 387 772 1678 2420 475
GO:0006355 regulation of transcription, DNA-dependent 17643 16 2748 963 322 395 355 1628 1052 561 1610 1259 1021 387 772 1678 2417 475
GO:0006396 RNA processing 5869 16 1104 370 196 196 221 429 207 229 609 404 388 157 236 324 574 225
GO:0034660 ncRNA metabolic process 3462 16 531 200 144 137 161 238 176 139 387 228 254 94 160 161 308 144
GO:0016071 mRNA metabolic process 2417 16 490 137 76 80 86 157 58 104 253 168 177 64 85 177 212 93
GO:0006399 tRNA metabolic process 2306 16 175 127 107 102 119 150 136 104 296 159 208 68 120 124 201 110
GO:0034470 ncRNA processing 2088 16 430 125 78 74 85 152 82 80 202 143 119 57 95 84 205 77
GO:0006397 mRNA processing 1952 16 279 117 65 67 72 130 49 97 226 142 153 61 74 165 177 78
GO:0008380 RNA splicing 1530 16 345 84 49 49 49 99 24 70 144 90 114 41 52 130 135 55
GO:0009451 RNA modification 1518 16 462 76 60 58 60 94 50 47 131 80 78 40 60 37 128 57
GO:0043039 tRNA aminoacylation 1266 16 67 62 67 64 76 66 92 59 185 71 132 38 63 76 81 67
GO:0006418 tRNA aminoacylation for protein translation 1246 16 67 62 64 64 74 66 90 58 179 70 130 37 63 74 81 67
GO:0016072 rRNA metabolic process 1127 16 358 62 39 38 41 75 40 37 89 61 55 29 40 40 87 36
GO:0051254 positive regulation of RNA metabolic process 1113 16 513 102 4 7 4 101 4 6 19 91 13 7 5 6 226 5
GO:0000375 RNA splicing, via transesterification reactions 1097 16 150 61 41 42 41 60 18 62 123 61 94 36 42 126 93 47
GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile 1097 16 150 61 41 42 41 60 18 62 123 61 94 36 42 126 93 47
GO:0006364 rRNA processing 1079 16 351 56 39 38 40 65 37 36 88 58 51 29 37 39 80 35
GO:0051253 negative regulation of RNA metabolic process 1076 16 428 98 7 10 7 125 7 14 22 123 18 13 11 5 179 9
GO:0045892 negative regulation of transcription, DNA-dependent 1075 16 428 98 7 10 7 125 7 14 21 123 18 13 11 5 179 9
GO:0045893 positive regulation of transcription, DNA-dependent 1064 16 513 102 2 1 2 101 1 1 8 90 6 3 4 2 225 3
GO:0000398 mRNA splicing, via spliceosome 1050 16 139 50 41 42 41 51 18 62 123 56 94 36 42 126 82 47
GO:0006366 transcription from RNA polymerase II promoter 1021 16 91 45 40 42 39 52 49 55 149 76 83 38 43 103 69 47
GO:0008033 tRNA processing 1017 16 80 65 41 39 44 83 45 46 112 85 77 31 58 48 119 44
GO:0006352 DNA-dependent transcription, initiation 813 16 57 46 34 42 34 55 52 29 116 51 78 27 34 42 79 37
GO:0006357 regulation of transcription from RNA polymerase II promoter 560 16 35 29 18 22 22 31 28 25 89 53 43 20 23 51 42 29
GO:0006401 RNA catabolic process 457 16 136 27 11 13 16 41 12 8 32 36 30 4 15 14 46 16
GO:0001510 RNA methylation 446 16 196 19 10 11 17 24 9 13 34 21 23 10 18 4 25 12
GO:0006354 DNA-dependent transcription, elongation 434 16 132 10 14 17 12 14 7 18 50 12 31 15 13 55 16 18
GO:0001522 pseudouridine synthesis 427 16 25 21 31 33 28 26 29 15 57 28 30 14 20 15 32 23
GO:0006342 chromatin silencing 408 16 254 26 2 2 1 33 1 3 2 41 1 2 1 1 36 2
GO:0031123 RNA 3'-end processing 375 16 34 22 16 19 23 36 14 19 49 25 24 12 13 19 37 13
GO:0006402 mRNA catabolic process 374 16 121 18 11 13 13 26 9 7 27 30 24 3 11 12 34 15
GO:0006400 tRNA modification 372 16 29 27 18 13 13 31 11 20 38 30 24 13 23 16 45 21
GO:0031050 dsRNA fragmentation 333 5 150 43 0 0 0 49 0 0 0 36 0 0 0 0 55 0
GO:0070918 production of small RNA involved in gene silencing by RNA 333 5 150 43 0 0 0 49 0 0 0 36 0 0 0 0 55 0
GO:0000956 nuclear-transcribed mRNA catabolic process 293 16 119 16 5 5 6 24 7 4 13 27 11 1 7 9 31 8
GO:0030422 production of siRNA involved in RNA interference 282 5 143 32 0 0 0 41 0 0 0 27 0 0 0 0 39 0
GO:0006367 transcription initiation from RNA polymerase II promoter 255 16 15 13 11 14 9 17 19 14 36 18 21 11 11 14 23 9
GO:0000394 RNA splicing, via endonucleolytic cleavage and ligation 240 16 144 7 5 4 4 9 3 5 13 8 8 2 6 3 14 5
GO:0043631 RNA polyadenylation 238 16 14 9 13 15 15 22 12 12 34 10 17 8 9 18 20 10
GO:0035196 production of miRNAs involved in gene silencing by miRNA 231 5 136 23 0 0 0 26 0 0 0 15 0 0 0 0 31 0
GO:0000154 rRNA modification 198 16 77 5 5 8 11 8 4 7 16 7 10 6 9 2 17 6
GO:0010267 production of ta-siRNAs involved in RNA interference 193 5 111 21 0 0 0 25 0 0 0 11 0 0 0 0 25 0
GO:0006368 transcription elongation from RNA polymerase II promoter 177 16 1 1 11 14 6 2 3 14 36 3 15 9 7 45 2 8
GO:0031124 mRNA 3'-end processing 175 16 15 11 7 8 10 14 3 9 17 13 13 6 6 14 22 7
GO:0031048 chromatin silencing by small RNA 165 5 119 11 0 0 0 11 0 0 0 14 0 0 0 0 10 0
GO:0032784 regulation of DNA-dependent transcription, elongation 153 16 9 5 4 8 7 5 7 7 24 8 19 8 7 14 10 11
GO:0006346 methylation-dependent chromatin silencing 152 5 124 6 0 0 0 6 0 0 0 8 0 0 0 0 8 0
GO:0016556 mRNA modification 148 7 125 6 0 0 1 7 0 0 1 1 0 0 0 0 7 0
GO:0006378 mRNA polyadenylation 116 16 9 7 5 5 7 8 3 4 12 8 8 4 4 13 15 4
GO:0000245 spliceosomal complex assembly 111 16 9 5 4 4 5 6 3 6 15 8 10 6 4 4 15 7
GO:0000387 spliceosomal snRNP assembly 107 16 7 5 4 4 5 6 2 7 16 11 8 4 5 7 10 6
GO:0042793 transcription from plastid promoter 104 5 72 7 0 0 0 8 0 0 0 9 0 0 0 0 8 0
GO:0006383 transcription from RNA polymerase III promoter 93 16 3 4 3 4 8 4 4 2 23 3 10 3 5 4 5 8
GO:0009452 7-methylguanosine RNA capping 91 16 10 5 2 3 3 10 7 5 14 8 7 2 3 1 9 2
GO:0036260 RNA capping 91 16 10 5 2 3 3 10 7 5 14 8 7 2 3 1 9 2
GO:0006388 tRNA splicing, via endonucleolytic cleavage and ligation 88 16 7 4 5 4 4 6 3 5 13 5 8 2 6 3 8 5
GO:0006419 alanyl-tRNA aminoacylation 84 16 4 4 4 4 6 4 9 5 14 4 5 2 4 5 5 5
GO:0006379 mRNA cleavage 78 16 11 6 4 4 4 9 1 4 3 7 4 2 3 2 10 4
GO:0034661 ncRNA catabolic process 78 13 15 10 0 0 1 16 3 1 1 7 4 0 3 1 15 1
GO:0045292 mRNA cis splicing, via spliceosome 77 15 12 5 5 3 5 4 0 2 8 6 6 3 3 1 9 5
GO:0006376 mRNA splice site selection 76 16 5 3 3 3 4 3 3 5 12 5 10 4 3 3 6 4
GO:0030488 tRNA methylation 76 16 5 3 4 5 4 7 1 5 8 5 6 2 6 2 9 4
GO:0031167 rRNA methylation 76 15 11 2 3 4 7 4 2 4 10 4 6 3 6 0 7 3
GO:0000184 nuclear-transcribed mRNA catabolic process, nonsense-mediated decay 72 12 12 5 0 0 4 8 6 0 5 8 6 0 3 1 10 4
GO:0006353 DNA-dependent transcription, termination 65 16 9 6 3 2 1 4 4 3 4 4 5 2 4 1 11 2
GO:0006426 glycyl-tRNA aminoacylation 64 16 4 3 4 3 5 3 6 1 7 2 8 1 4 2 5 6
GO:0002097 tRNA wobble base modification 63 16 5 5 2 1 3 5 1 3 5 4 7 2 5 3 8 4
GO:0043628 ncRNA 3'-end processing 63 14 11 6 1 1 5 5 2 2 10 7 2 2 2 0 7 0
GO:0006433 prolyl-tRNA aminoacylation 61 16 3 2 2 6 6 2 3 2 6 2 8 1 2 10 4 2
GO:0050684 regulation of mRNA processing 60 13 8 6 1 1 1 8 0 4 2 8 2 0 1 0 16 2
GO:0006421 asparaginyl-tRNA aminoacylation 59 16 6 3 3 3 5 3 1 3 7 4 7 1 2 1 5 5
GO:0006370 7-methylguanosine mRNA capping 58 15 7 3 2 3 2 7 4 3 8 7 2 2 1 0 5 2
GO:0006429 leucyl-tRNA aminoacylation 57 16 2 4 5 3 5 4 2 2 6 2 6 2 4 2 4 4
GO:0032786 positive regulation of DNA-dependent transcription, elongation 57 16 2 2 2 6 2 1 3 5 11 2 7 4 1 4 3 2
GO:0051090 regulation of sequence-specific DNA binding transcription factor activity 57 15 8 6 1 1 1 7 1 1 5 8 1 0 1 3 12 1
GO:0006434 seryl-tRNA aminoacylation 56 16 2 2 3 2 6 4 2 2 8 5 5 2 4 2 5 2
GO:0006438 valyl-tRNA aminoacylation 55 16 3 2 3 2 2 5 3 2 3 3 9 2 4 4 5 3
GO:0090501 RNA phosphodiester bond hydrolysis 54 11 21 4 0 0 3 4 1 0 4 5 3 0 3 0 5 1
GO:0006432 phenylalanyl-tRNA aminoacylation 53 16 3 6 3 3 3 3 2 3 4 4 3 2 4 2 5 3
GO:0000288 nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay 50 15 6 4 3 2 2 5 0 2 3 5 3 1 2 3 7 2
GO:0006359 regulation of transcription from RNA polymerase III promoter 50 16 1 1 2 3 4 1 3 1 12 2 6 2 3 3 1 5
GO:0031086 nuclear-transcribed mRNA catabolic process, deadenylation-independent decay 50 5 9 6 0 0 0 10 0 0 0 13 0 0 0 0 12 0
GO:0031087 deadenylation-independent decapping of nuclear-transcribed mRNA 50 5 9 6 0 0 0 10 0 0 0 13 0 0 0 0 12 0
GO:0034227 tRNA thio-modification 50 16 4 3 2 2 2 3 2 3 4 2 5 3 4 5 3 3
GO:0000373 Group II intron splicing 49 5 11 10 0 0 0 9 0 0 0 6 0 0 0 0 13 0
GO:0006435 threonyl-tRNA aminoacylation 49 16 4 2 2 3 3 2 1 2 3 6 3 2 2 9 3 2
GO:0016073 snRNA metabolic process 48 14 2 2 1 1 3 2 2 2 10 6 4 2 4 0 7 0
GO:0016075 rRNA catabolic process 48 13 7 6 0 0 1 10 3 1 1 3 4 0 3 1 7 1
GO:0002098 tRNA wobble uridine modification 47 16 4 4 1 1 2 4 1 2 4 3 4 1 4 3 6 3
GO:0043484 regulation of RNA splicing 47 13 6 5 1 1 1 6 0 4 2 5 2 0 1 0 11 2
GO:0000959 mitochondrial RNA metabolic process 46 5 25 6 0 0 0 7 0 0 0 1 0 0 0 0 7 0
GO:0006436 tryptophanyl-tRNA aminoacylation 46 16 2 2 3 2 2 3 1 1 7 2 7 1 3 3 3 4
GO:0010586 miRNA metabolic process 46 5 9 8 0 0 0 12 0 0 0 5 0 0 0 0 12 0
GO:0008616 queuosine biosynthetic process 45 15 0 2 4 2 1 2 3 3 7 4 2 2 3 1 5 4
GO:0006428 isoleucyl-tRNA aminoacylation 43 14 3 2 2 1 3 4 1 0 6 3 5 0 2 1 8 2
GO:0006430 lysyl-tRNA aminoacylation 43 16 3 5 2 2 2 2 2 2 5 5 2 1 2 2 4 2
GO:0034243 regulation of transcription elongation from RNA polymerase II promoter 43 16 1 1 1 5 1 2 3 3 10 3 3 2 1 4 2 1
GO:1900864 mitochondrial RNA modification 41 4 24 5 0 0 0 6 0 0 0 0 0 0 0 0 6 0
GO:0006424 glutamyl-tRNA aminoacylation 40 16 5 3 1 2 1 3 1 3 4 4 2 2 2 2 3 2
GO:0006431 methionyl-tRNA aminoacylation 40 16 2 3 4 1 2 3 3 2 2 3 5 1 3 2 3 1
GO:0016180 snRNA processing 40 14 2 2 1 1 3 2 2 2 10 2 4 2 4 0 3 0
GO:0006269 DNA replication, synthesis of RNA primer 39 15 3 2 3 3 2 2 3 2 3 3 2 1 2 5 3 0
GO:0031425 chloroplast RNA processing 35 5 14 4 0 0 0 4 0 0 0 3 0 0 0 0 10 0
GO:0031935 regulation of chromatin silencing 35 5 14 4 0 0 0 5 0 0 0 6 0 0 0 0 6 0
GO:0032968 positive regulation of transcription elongation from RNA polymerase II promoter 35 13 0 0 1 5 1 0 3 3 9 1 3 2 1 4 1 1
GO:0010599 production of lsiRNA involved in RNA interference 34 5 4 9 0 0 0 11 0 0 0 2 0 0 0 0 8 0
GO:0031053 primary miRNA processing 34 5 6 5 0 0 0 6 0 0 0 7 0 0 0 0 10 0
GO:0006422 aspartyl-tRNA aminoacylation 33 15 2 6 2 1 2 2 0 1 7 1 4 1 1 1 1 1
GO:0006423 cysteinyl-tRNA aminoacylation 33 14 3 3 0 0 2 3 1 1 2 5 2 2 2 1 4 2
GO:0048024 regulation of mRNA splicing, via spliceosome 33 13 3 3 1 1 1 3 0 4 2 3 2 0 1 0 7 2
GO:0000469 cleavage involved in rRNA processing 32 7 19 3 0 0 0 3 1 0 1 2 0 0 0 0 3 0
GO:0006420 arginyl-tRNA aminoacylation 32 16 2 2 1 2 2 2 2 1 5 1 7 1 1 1 1 1
GO:0080156 mitochondrial mRNA modification 31 4 22 3 0 0 0 4 0 0 0 0 0 0 0 0 2 0
GO:0010587 miRNA catabolic process 30 5 8 4 0 0 0 6 0 0 0 4 0 0 0 0 8 0
GO:0016480 negative regulation of transcription from RNA polymerase III promoter 30 16 1 1 1 2 2 1 2 1 8 2 4 1 1 1 1 1
GO:0042780 tRNA 3'-end processing 30 9 5 4 0 0 2 4 0 0 3 5 1 0 1 0 5 0
GO:0000244 spliceosomal tri-snRNP complex assembly 29 14 2 1 1 2 2 2 0 1 4 1 4 0 1 3 4 1
GO:0000966 RNA 5'-end processing 28 2 4 0 0 0 0 0 0 0 0 0 0 0 0 0 24 0
GO:0000289 nuclear-transcribed mRNA poly(A) tail shortening 27 5 6 4 0 0 0 5 0 0 0 5 0 0 0 0 7 0
GO:0000291 nuclear-transcribed mRNA catabolic process, exonucleolytic 27 9 4 3 0 0 0 4 1 0 2 3 0 0 1 2 7 0
GO:0006427 histidyl-tRNA aminoacylation 27 12 3 2 0 1 2 2 0 0 4 2 2 0 2 1 5 1
GO:0019988 charged-tRNA amino acid modification 27 16 1 1 3 1 1 1 1 2 2 1 3 3 3 1 1 2
GO:0031440 regulation of mRNA 3'-end processing 27 5 5 3 0 0 0 5 0 0 0 5 0 0 0 0 9 0
GO:0043620 regulation of DNA-dependent transcription in response to stress 27 5 5 2 0 0 0 4 0 0 0 6 0 0 0 0 10 0
GO:0034472 snRNA 3'-end processing 26 14 1 1 1 1 3 1 2 2 7 1 1 2 1 0 2 0
GO:0034477 U6 snRNA 3'-end processing 26 14 1 1 1 1 3 1 2 2 7 1 1 2 1 0 2 0
GO:0000478 endonucleolytic cleavage involved in rRNA processing 25 5 18 2 0 0 0 2 0 0 0 1 0 0 0 0 2 0
GO:0090502 RNA phosphodiester bond hydrolysis, endonucleolytic 25 5 18 2 0 0 0 2 0 0 0 1 0 0 0 0 2 0
GO:0043433 negative regulation of sequence-specific DNA binding transcription factor activity 24 5 5 4 0 0 0 5 0 0 0 3 0 0 0 0 7 0
GO:0000290 deadenylation-dependent decapping of nuclear-transcribed mRNA 23 10 0 0 3 2 2 0 0 2 3 0 3 1 2 3 0 2
GO:0001682 tRNA 5'-leader removal 23 12 3 2 0 0 0 2 1 1 1 3 3 1 1 0 4 1
GO:0006348 chromatin silencing at telomere 23 16 1 1 2 2 1 1 1 3 2 1 1 2 1 1 1 2
GO:0035279 mRNA cleavage involved in gene silencing by miRNA 23 5 7 3 0 0 0 5 0 0 0 3 0 0 0 0 5 0
GO:0070919 production of siRNA involved in chromatin silencing by small RNA 22 5 3 6 0 0 0 4 0 0 0 5 0 0 0 0 4 0
GO:0000380 alternative mRNA splicing, via spliceosome 20 5 4 3 0 0 0 4 0 0 0 3 0 0 0 0 6 0
GO:0006425 glutaminyl-tRNA aminoacylation 20 15 1 1 2 2 1 2 2 1 1 1 1 1 1 0 2 1
GO:0060211 regulation of nuclear-transcribed mRNA poly(A) tail shortening 20 5 4 2 0 0 0 4 0 0 0 4 0 0 0 0 6 0
GO:0061013 regulation of mRNA catabolic process 20 5 4 2 0 0 0 4 0 0 0 4 0 0 0 0 6 0
GO:1900151 regulation of nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay 20 5 4 2 0 0 0 4 0 0 0 4 0 0 0 0 6 0
GO:0016553 base conversion or substitution editing 18 5 7 2 0 0 0 4 0 0 0 1 0 0 0 0 4 0
GO:0070481 nuclear-transcribed mRNA catabolic process, non-stop decay 18 8 0 0 2 3 0 0 0 2 3 0 2 0 1 3 0 2
GO:0070966 nuclear-transcribed mRNA catabolic process, no-go decay 18 8 0 0 2 3 0 0 0 2 3 0 2 0 1 3 0 2
GO:0071025 RNA surveillance 18 8 0 0 2 3 0 0 0 2 3 0 2 0 1 3 0 2
GO:0010239 chloroplast mRNA processing 17 5 4 3 0 0 0 3 0 0 0 2 0 0 0 0 5 0
GO:0043618 regulation of transcription from RNA polymerase II promoter in response to stress 17 5 3 2 0 0 0 2 0 0 0 5 0 0 0 0 5 0
GO:0070475 rRNA base methylation 17 10 2 0 0 1 0 2 0 1 3 2 2 1 2 0 1 0
GO:0002100 tRNA wobble adenosine to inosine editing 16 13 1 1 1 0 1 1 0 1 1 1 3 1 1 0 2 1
GO:0006384 transcription initiation from RNA polymerase III promoter 16 6 0 0 0 0 2 0 0 0 8 0 2 1 1 0 0 2
GO:0006437 tyrosyl-tRNA aminoacylation 16 14 1 1 1 0 1 1 1 1 2 1 2 0 1 1 1 1
GO:1900865 chloroplast RNA modification 16 4 4 3 0 0 0 3 0 0 0 0 0 0 0 0 6 0
GO:1901259 chloroplast rRNA processing 16 5 4 3 0 0 0 3 0 0 0 2 0 0 0 0 4 0
GO:0009303 rRNA transcription 15 7 3 2 0 0 0 2 0 0 1 4 0 1 0 0 2 0
GO:0042779 tRNA 3'-trailer cleavage 15 9 2 1 0 0 2 1 0 0 2 3 1 0 1 0 2 0
GO:0000381 regulation of alternative mRNA splicing, via spliceosome 14 5 2 2 0 0 0 3 0 0 0 2 0 0 0 0 5 0
GO:0010501 RNA secondary structure unwinding 14 5 2 2 0 0 0 3 0 0 0 4 0 0 0 0 3 0
GO:0016554 cytidine to uridine editing 13 4 6 2 0 0 0 3 0 0 0 0 0 0 0 0 2 0
GO:0030490 maturation of SSU-rRNA 13 5 9 1 0 0 0 1 0 0 0 1 0 0 0 0 1 0
GO:0006344 maintenance of chromatin silencing 12 5 2 2 0 0 0 2 0 0 0 1 0 0 0 0 5 0
GO:0009299 mRNA transcription 12 5 4 2 0 0 0 1 0 0 0 2 0 0 0 0 3 0
GO:0031937 positive regulation of chromatin silencing 12 5 6 1 0 0 0 1 0 0 0 2 0 0 0 0 2 0
GO:0039694 viral RNA genome replication 12 5 0 0 0 0 3 0 0 2 0 0 4 2 0 0 0 1
GO:0039703 RNA replication 12 5 0 0 0 0 3 0 0 2 0 0 4 2 0 0 0 1
GO:0090308 regulation of methylation-dependent chromatin silencing 12 5 6 1 0 0 0 1 0 0 0 2 0 0 0 0 2 0
GO:0090309 positive regulation of methylation-dependent chromatin silencing 12 5 6 1 0 0 0 1 0 0 0 2 0 0 0 0 2 0
GO:0000122 negative regulation of transcription from RNA polymerase II promoter 10 8 0 0 0 1 0 1 0 1 2 0 2 0 1 0 1 1
GO:0045944 positive regulation of transcription from RNA polymerase II promoter 10 6 3 1 0 0 0 1 0 0 1 2 0 0 0 0 2 0
GO:0006990 positive regulation of transcription from RNA polymerase II promoter involved in unfolded protein response 9 5 3 1 0 0 0 1 0 0 0 2 0 0 0 0 2 0
GO:0031554 regulation of DNA-dependent transcription, termination 9 7 2 1 0 0 0 0 2 0 1 0 1 0 1 0 1 0
GO:0036265 RNA (guanine-N7)-methylation 9 5 3 0 0 0 0 3 0 0 1 0 1 0 1 0 0 0
GO:0043619 regulation of transcription from RNA polymerase II promoter in response to oxidative stress 9 5 1 1 0 0 0 1 0 0 0 4 0 0 0 0 2 0
GO:0045013 carbon catabolite repression of transcription 9 5 1 1 0 0 0 1 0 0 0 4 0 0 0 0 2 0
GO:0045014 negative regulation of transcription by glucose 9 5 1 1 0 0 0 1 0 0 0 4 0 0 0 0 2 0
GO:0045990 carbon catabolite regulation of transcription 9 5 1 1 0 0 0 1 0 0 0 4 0 0 0 0 2 0
GO:0046015 regulation of transcription by glucose 9 5 1 1 0 0 0 1 0 0 0 4 0 0 0 0 2 0
GO:0071951 conversion of methionyl-tRNA to N-formyl-methionyl-tRNA 9 9 1 1 0 0 0 1 0 1 1 1 0 0 1 0 1 1
GO:1901522 positive regulation of transcription from RNA polymerase II promoter involved in cellular response to chemical stimulus 9 5 3 1 0 0 0 1 0 0 0 2 0 0 0 0 2 0
GO:0000354 cis assembly of pre-catalytic spliceosome 8 5 2 1 0 0 0 1 0 0 0 1 0 0 0 0 3 0
GO:0000462 maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) 8 1 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
GO:0031054 pre-miRNA processing 8 5 1 1 0 0 0 3 0 0 0 1 0 0 0 0 2 0
GO:0031120 snRNA pseudouridine synthesis 8 2 0 0 0 0 0 0 0 0 0 4 0 0 0 0 4 0
GO:0040031 snRNA modification 8 2 0 0 0 0 0 0 0 0 0 4 0 0 0 0 4 0
GO:0061392 regulation of transcription from RNA polymerase II promoter in response to osmotic stress 8 5 2 1 0 0 0 1 0 0 0 1 0 0 0 0 3 0
GO:0061416 regulation of transcription from RNA polymerase II promoter in response to salt stress 8 5 2 1 0 0 0 1 0 0 0 1 0 0 0 0 3 0
GO:0080009 mRNA methylation 8 7 1 2 0 0 1 1 0 0 1 1 0 0 0 0 1 0
GO:0002103 endonucleolytic cleavage of tetracistronic rRNA transcript (SSU-rRNA, LSU-rRNA, 4.5S-rRNA, 5S-rRNA) 7 4 2 1 0 0 0 2 0 0 0 0 0 0 0 0 2 0
GO:0016074 snoRNA metabolic process 7 5 2 1 0 0 0 1 0 0 0 1 0 0 0 0 2 0
GO:0031125 rRNA 3'-end processing 7 3 5 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0
GO:0031555 transcriptional attenuation 7 5 2 1 0 0 0 0 2 0 0 0 0 0 1 0 1 0
GO:0031564 transcription antitermination 7 5 2 1 0 0 0 0 2 0 0 0 0 0 1 0 1 0
GO:0042794 rRNA transcription from plastid promoter 7 5 1 1 0 0 0 1 0 0 0 3 0 0 0 0 1 0
GO:0043144 snoRNA processing 7 5 2 1 0 0 0 1 0 0 0 1 0 0 0 0 2 0
GO:0090503 RNA phosphodiester bond hydrolysis, exonucleolytic 7 5 0 0 0 0 1 0 0 0 1 0 2 0 2 0 0 1
GO:1900363 regulation of mRNA polyadenylation 7 5 1 1 0 0 0 1 0 0 0 1 0 0 0 0 3 0
GO:0000372 Group I intron splicing 6 5 1 1 0 0 0 1 0 0 0 2 0 0 0 0 1 0
GO:0000376 RNA splicing, via transesterification reactions with guanosine as nucleophile 6 5 1 1 0 0 0 1 0 0 0 2 0 0 0 0 1 0
GO:0000963 mitochondrial RNA processing 6 5 2 1 0 0 0 1 0 0 0 1 0 0 0 0 1 0
GO:0034427 nuclear-transcribed mRNA catabolic process, exonucleolytic, 3'-5' 6 4 0 0 0 0 0 0 1 0 2 0 0 0 1 2 0 0
GO:0070526 threonylcarbamoyladenosine biosynthetic process 6 5 1 1 0 0 0 2 0 0 0 1 0 0 0 0 1 0
GO:1900871 chloroplast mRNA modification 6 4 2 1 0 0 0 1 0 0 0 0 0 0 0 0 2 0
GO:0000374 Group III intron splicing 5 4 1 2 0 0 0 1 0 0 0 1 0 0 0 0 0 0
GO:0000470 maturation of LSU-rRNA 5 5 1 1 0 0 0 1 0 0 0 1 0 0 0 0 1 0
GO:0000488 maturation of LSU-rRNA from tetracistronic rRNA transcript (SSU-rRNA, LSU-rRNA, 4.5S-rRNA, 5S-rRNA) 5 5 1 1 0 0 0 1 0 0 0 1 0 0 0 0 1 0
GO:0000489 maturation of SSU-rRNA from tetracistronic rRNA transcript (SSU-rRNA, LSU-rRNA, 4.5S-rRNA, 5S-rRNA) 5 5 1 1 0 0 0 1 0 0 0 1 0 0 0 0 1 0
GO:0000957 mitochondrial RNA catabolic process 5 5 1 1 0 0 0 1 0 0 0 1 0 0 0 0 1 0
GO:0009301 snRNA transcription 5 5 1 1 0 0 0 1 0 0 0 1 0 0 0 0 1 0
GO:0009304 tRNA transcription 5 5 1 1 0 0 0 1 0 0 0 1 0 0 0 0 1 0
GO:0010964 regulation of chromatin silencing by small RNA 5 5 1 1 0 0 0 1 0 0 0 1 0 0 0 0 1 0
GO:0071076 RNA 3' uridylation 5 5 1 1 0 0 0 1 0 0 0 1 0 0 0 0 1 0
GO:0000447 endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) 4 1 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
GO:0000460 maturation of 5.8S rRNA 4 1 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
GO:0000461 endonucleolytic cleavage to generate mature 3'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA) 4 1 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
GO:0000466 maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) 4 1 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
GO:0000479 endonucleolytic cleavage of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) 4 1 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
GO:0000390 spliceosomal complex disassembly 3 3 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 1
GO:0002143 tRNA wobble position uridine thiolation 3 3 0 0 0 0 0 0 0 1 0 0 1 0 1 0 0 0
GO:0006360 transcription from RNA polymerase I promoter 3 1 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
GO:0002943 tRNA dihydrouridine synthesis 2 2 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0
GO:0031426 polycistronic mRNA processing 2 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0
GO:0031936 negative regulation of chromatin silencing 2 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
GO:0043137 DNA replication, removal of RNA primer 2 2 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0
GO:0070940 dephosphorylation of RNA polymerase II C-terminal domain 2 2 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0
GO:0000183 chromatin silencing at rDNA 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
GO:0000395 mRNA 5'-splice site recognition 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
GO:0001680 tRNA 3'-terminal CCA addition 1 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0
GO:0006369 termination of RNA polymerase II transcription 1 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0
GO:0030466 chromatin silencing at silent mating-type cassette 1 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0
GO:0031118 rRNA pseudouridine synthesis 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
GO:0031591 wybutosine biosynthetic process 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
GO:0032785 negative regulation of DNA-dependent transcription, elongation 1 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0
GO:0034244 negative regulation of transcription elongation from RNA polymerase II promoter 1 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0
GO:0097056 selenocysteinyl-tRNA(Sec) biosynthetic process 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
GO:2000232 regulation of rRNA processing 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
GO:2000234 positive regulation of rRNA processing 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0