Tree Explorer: HOM03D002010  

Viewing
Species colored phylogenetic tree with associated protein domains.

Protein domain view



Archaeopteryx/Forester requires at least Java 1.5 To determine which version of Java your web browser is using, please visit javatester

Legend

IPR006823
    Neutral/alkaline nonlysosomal ceramidase
IPR002326
    Cytochrome c1
IPR021157
    Cytochrome c1, transmembrane anchor, C-terminal
IPR009056
    Cytochrome c-like domain
Protein domains lacking coordinates are not displayed in the phylogenetic tree. This may appear to cause inconsistencies between the various pages also showing InterPro domain information.

Download

Download Newick Download PhyloXML

Multiple Sequence Alignment information

Method
muscle
Length
458
View alignment of the entire gene family
Stripped length
245
View edited alignment used for tree construction

Outlier/stripped gene information

Gene id Status Cause
PME00129396 removed partial
PAB00038978 removed partial
PGL00003525 removed partial
CMI00023848 removed partial
PSY00027842 removed partial
PSI00012057 removed partial
GBI00024570 removed partial
PTA00025456 removed partial
GBI00008618 removed partial
PPI00044014 removed partial
PPI00044777 removed partial
ATR_00007G03820 removed partial
GBI00026166 removed partial
PPI00041662 removed partial
PAB00040065 removed partial
GMO00022513 removed outlier
PME00138347 removed outlier
PSI00010733 removed outlier