Tree Explorer: HOM03D000102  

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Species colored phylogenetic tree with associated protein domains.
Warning
The stripped multiple sequence alignment used to infer the phylogenetic tree is only 19 amino acids long

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Protein domain view



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Legend

IPR002182
    NB-ARC
IPR027417
    P-loop containing nucleoside triphosphate hydrolase
IPR017986
    WD40-repeat-containing domain
IPR006595
    CTLH, C-terminal LisH motif
IPR017930
    Myb domain
IPR006594
    LisH dimerisation motif
IPR006447
    Myb domain, plants
IPR011044
    Quinoprotein amine dehydrogenase, beta chain-like
IPR011048
    Cytochrome cd1-nitrite reductase-like, haem d1 domain
IPR013720
    LisH dimerisation motif, subgroup
IPR011047
    Quinonprotein alcohol dehydrogenase-like superfamily
IPR001005
    SANT/Myb domain
IPR011045
    Nitrous oxide reductase, N-terminal
IPR001680
    WD40 repeat
IPR027728
    Topless family
IPR014710
    RmlC-like jelly roll fold
IPR000767
    Disease resistance protein
IPR015943
    WD40/YVTN repeat-like-containing domain
IPR009057
    Homeodomain-like
Protein domains lacking coordinates are not displayed in the phylogenetic tree. This may appear to cause inconsistencies between the various pages also showing InterPro domain information.

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Multiple Sequence Alignment information

Method
muscle
Length
2354
View alignment of the entire gene family
Stripped length
19
View edited alignment used for tree construction

Outlier/stripped gene information

Gene id Status Cause
PTA00064421 removed too diverged
PTA00014547 removed too diverged
PME00128212 removed partial
PTA00069962 removed partial
GMO00019632 removed partial
CMI00015873 removed partial
GBI00005516 removed partial
GBI00005523 removed partial
PME00054466 removed partial
GMO00018411 removed partial
GMO00018009 removed partial
PME00054485 removed partial
PTA00036309 removed partial
PME00054475 removed partial
TBA00017766 removed partial
GBI00009549 removed partial
GMO00021217 removed partial
GBI00009492 removed partial
CMI00024048 removed partial
CMI00008436 removed partial
GBI00002425 removed partial
GBI00024750 removed partial
PTA00042739 removed partial
TBA00022769 removed partial
GMO00019970 removed partial
GBI00009212 removed partial
GMO00019929 removed partial
GMO00018795 removed partial
PAB00030754 removed partial
TBA00023375 removed partial
CMI00019977 removed outlier
GBI00002424 removed outlier
GBI00004251 removed outlier
PME00054476 removed outlier
PME00054479 removed outlier
PME00108091 removed outlier
PME00116757 removed outlier
PPI00021474 removed outlier
PTA00002331 removed outlier
PTA00002334 removed outlier
PTA00002818 removed outlier
PTA00018502 removed outlier
PTA00020106 removed outlier
PTA00026472 removed outlier
PTA00032846 removed outlier
PTA00033633 removed outlier
PTA00036308 removed outlier
PTA00038483 removed outlier
PTA00038485 removed outlier
PTA00038486 removed outlier
PTA00039966 removed outlier
PTA00041711 removed outlier
PTA00047963 removed outlier
PTA00053279 removed outlier
PTA00058023 removed outlier
PTA00064753 removed outlier