Strain |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
  |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
Agrobacterium tumefaciens C58 (Uwash) | 99 | 1.83 | 401 | 7.41 | 1862 | 34.39 | 254 | 4.69 | 2798 | 51.68 | 5414 | 40 | 2116 | 39.08 |
Aquifex aeolicus V5 | 14 | 0.92 | 585 | 38.29 | 195 | 12.76 | 24 | 1.57 | 710 | 46.47 | 1528 | 107 | 219 | 14.33 |
Bacillus anthracis str. Ames | 160 | 2.99 | 741 | 13.87 | 1624 | 30.39 | 91 | 1.7 | 2728 | 51.05 | 5344 | 73 | 1715 | 32.09 |
Bacillus cereus ATCC14579 | 138 | 2.62 | 588 | 11.16 | 1755 | 33.31 | 84 | 1.59 | 2703 | 51.31 | 5268 | 72 | 1839 | 34.91 |
Bacillus halodurans | 168 | 4.11 | 1019 | 24.91 | 1021 | 24.96 | 136 | 3.32 | 1747 | 42.7 | 4091 | 75 | 1157 | 28.28 |
Bacillus subtilis | 93 | 2.25 | 940 | 22.76 | 1173 | 28.4 | 133 | 3.22 | 1791 | 43.37 | 4130 | 74 | 1306 | 31.62 |
Bacteroides thetaiotaomicron VPI-5482 | 160 | 3.34 | 2174 | 45.36 | 1201 | 25.06 | 332 | 6.93 | 926 | 19.32 | 4793 | 47 | 1533 | 31.98 |
Bifidobacterium longum | 34 | 1.96 | 648 | 37.39 | 311 | 17.95 | 28 | 1.62 | 712 | 41.08 | 1733 | 98 | 339 | 19.56 |
Borrelia burgdorferi | 5 | 0.58 | 397 | 46.43 | 91 | 10.64 | 0 | 0 | 362 | 42.34 | 855 | 92 | 91 | 10.64 |
Bradyrhizobium japonicum | 226 | 2.72 | 2761 | 33.19 | 3032 | 36.44 | 286 | 3.44 | 2015 | 24.22 | 8320 | 37 | 3318 | 39.88 |
Brucella melitensis | 98 | 3.05 | 191 | 5.95 | 857 | 26.7 | 86 | 2.68 | 1978 | 61.62 | 3210 | 42 | 943 | 29.38 |
Brucella suis 1330 | 89 | 2.72 | 375 | 11.46 | 721 | 22.03 | 102 | 3.12 | 1986 | 60.68 | 3273 | 41 | 823 | 25.15 |
Buchnera aphidicola str. Bp | 13 | 2.56 | 14 | 2.76 | 36 | 7.1 | 0 | 0 | 444 | 87.57 | 507 | 15 | 36 | 7.1 |
Buchnera aphidicola str. Sg | 13 | 2.37 | 3 | 0.55 | 50 | 9.12 | 0 | 0 | 482 | 87.96 | 548 | 17 | 50 | 9.12 |
Buchnera sp. str. APS | 12 | 2.12 | 7 | 1.23 | 54 | 9.52 | 0 | 0 | 494 | 87.13 | 567 | 16 | 54 | 9.52 |
Campylobacter jejuni | 12 | 0.73 | 485 | 29.52 | 245 | 14.91 | 9 | 0.55 | 892 | 54.29 | 1643 | 43 | 254 | 15.46 |
Caulobacter crescentus | 81 | 2.16 | 1212 | 32.38 | 935 | 24.98 | 18 | 0.48 | 1497 | 39.99 | 3743 | 36 | 953 | 25.46 |
Chlamydia muridarum | 7 | 0.77 | 50 | 5.48 | 81 | 8.88 | 0 | 0 | 774 | 84.87 | 912 | 57 | 81 | 8.88 |
Chlamydia trachomatis | 7 | 0.78 | 41 | 4.56 | 75 | 8.33 | 6 | 0.67 | 771 | 85.67 | 900 | 56 | 81 | 9 |
Chlamydophila caviae GPIC | 7 | 0.7 | 136 | 13.59 | 97 | 9.69 | 0 | 0 | 761 | 76.02 | 1001 | 55 | 97 | 9.69 |
Chlamydophila pneumoniae AR39 | 8 | 0.72 | 74 | 6.65 | 125 | 11.23 | 0 | 0 | 906 | 81.4 | 1113 | 54 | 125 | 11.23 |
Chlamydophila pneumoniae CWL029 | 8 | 0.76 | 2 | 0.19 | 130 | 12.32 | 0 | 0 | 915 | 86.73 | 1055 | 52 | 130 | 12.32 |
Chlamydophila pneumoniae J138 | 8 | 0.75 | 16 | 1.5 | 135 | 12.63 | 0 | 0 | 910 | 85.13 | 1069 | 53 | 135 | 12.63 |
Chlorobium tepidum TLS | 21 | 0.93 | 1043 | 46.19 | 317 | 14.04 | 14 | 0.62 | 863 | 38.22 | 2258 | 46 | 331 | 14.66 |
Clostridium acetobutylicum | 59 | 1.59 | 1135 | 30.63 | 1063 | 28.69 | 56 | 1.51 | 1392 | 37.57 | 3705 | 60 | 1119 | 30.2 |
Clostridium perfringens | 40 | 1.49 | 708 | 26.33 | 676 | 25.14 | 53 | 1.97 | 1212 | 45.07 | 2689 | 62 | 729 | 27.11 |
Clostridium tetani E88 | 81 | 3.39 | 509 | 21.29 | 585 | 24.47 | 52 | 2.17 | 1164 | 48.68 | 2391 | 59 | 637 | 26.64 |
Corynebacterium efficiens YS-314 | 140 | 4.72 | 534 | 18.01 | 569 | 19.19 | 50 | 1.69 | 1672 | 56.39 | 2965 | 100 | 619 | 20.88 |
Corynebacterium glutamicum ATCC 13032 | 63 | 2.02 | 666 | 21.36 | 669 | 21.46 | 56 | 1.8 | 1664 | 53.37 | 3118 | 99 | 725 | 23.25 |
Coxiella burnetii RSA493 | 41 | 2.04 | 947 | 47.09 | 245 | 12.18 | 0 | 0 | 778 | 38.69 | 2011 | 25 | 245 | 12.18 |
Deinococcus radiodurans R1 | 52 | 1.77 | 1416 | 48.08 | 478 | 16.23 | 18 | 0.61 | 981 | 33.31 | 2945 | 48 | 496 | 16.84 |
Enterococcus faecalis V583 | 112 | 3.58 | 916 | 29.31 | 787 | 25.18 | 140 | 4.48 | 1170 | 37.44 | 3125 | 80 | 927 | 29.66 |
Escherichia coli CFT073 | 411 | 7.61 | 886 | 16.41 | 1435 | 26.57 | 262 | 4.85 | 2406 | 44.56 | 5400 | 6 | 1697 | 31.43 |
Escherichia coli K12 (MG1655) | 250 | 5.8 | 155 | 3.6 | 1302 | 30.2 | 180 | 4.18 | 2424 | 56.23 | 4311 | 2 | 1482 | 34.38 |
Escherichia coli O157:H7 EDL933 | 924 | 17.21 | 167 | 3.11 | 1338 | 24.92 | 339 | 6.31 | 2602 | 48.45 | 5370 | 5 | 1677 | 31.23 |
Escherichia coli O157:H7 RIMD0509952 | 933 | 17.33 | 201 | 3.73 | 1352 | 25.12 | 258 | 4.79 | 2639 | 49.02 | 5383 | 4 | 1610 | 29.91 |
Fusobacterium nucleatum ATCC25586 | 55 | 2.64 | 706 | 33.91 | 402 | 19.31 | 53 | 2.55 | 866 | 41.59 | 2082 | 58 | 455 | 21.85 |
Haemophilus influenzae Rd | 43 | 2.49 | 197 | 11.41 | 303 | 17.54 | 43 | 2.49 | 1141 | 66.07 | 1727 | 13 | 346 | 20.03 |
Helicobacter pylori 26695 | 22 | 1.4 | 158 | 10.04 | 235 | 14.94 | 14 | 0.89 | 1144 | 72.73 | 1573 | 45 | 249 | 15.83 |
Helicobacter pylori J99 | 12 | 0.8 | 95 | 6.37 | 223 | 14.96 | 4 | 0.27 | 1157 | 77.6 | 1491 | 44 | 227 | 15.22 |
Lactobacillus plantarum WCFS1 | 131 | 4.33 | 836 | 27.65 | 996 | 32.94 | 69 | 2.28 | 992 | 32.8 | 3024 | 79 | 1065 | 35.22 |
Lactococcus lactis IL1403 | 209 | 9.22 | 510 | 22.51 | 543 | 23.96 | 17 | 0.75 | 987 | 43.56 | 2266 | 81 | 560 | 24.71 |
Leptospira intrerrogans str. 56601 | 93 | 1.97 | 3044 | 64.34 | 701 | 14.82 | 6 | 0.13 | 887 | 18.75 | 4731 | 91 | 707 | 14.94 |
Listeria innocua Clip11262 | 148 | 4.96 | 185 | 6.2 | 795 | 26.62 | 132 | 4.42 | 1726 | 57.8 | 2986 | 77 | 927 | 31.04 |
Listeria monocytogenes EGD-e | 95 | 3.32 | 145 | 5.06 | 823 | 28.74 | 88 | 3.07 | 1713 | 59.81 | 2864 | 76 | 911 | 31.81 |
Mesorhizobium loti MAFF303099 | 167 | 2.47 | 1704 | 25.21 | 2442 | 36.13 | 146 | 2.16 | 2299 | 34.02 | 6758 | 38 | 2588 | 38.3 |
Mycobacterium leprae TN | 15 | 0.93 | 172 | 10.7 | 262 | 16.29 | 12 | 0.75 | 1147 | 71.33 | 1608 | 101 | 274 | 17.04 |
Mycobacterium tuberculosis CDC1551 | 70 | 1.67 | 506 | 12.08 | 1085 | 25.89 | 73 | 1.74 | 2456 | 58.62 | 4190 | 103 | 1158 | 27.64 |
Mycobacterium tuberculosis H37Rv | 101 | 2.58 | 168 | 4.29 | 1119 | 28.55 | 70 | 1.79 | 2461 | 62.8 | 3919 | 102 | 1189 | 30.34 |
Mycoplasma gallisepticum R | 6 | 0.82 | 263 | 35.93 | 137 | 18.72 | 0 | 0 | 326 | 44.54 | 732 | 64 | 137 | 18.72 |
Mycoplasma genitalium G37 | 2 | 0.41 | 12 | 2.48 | 43 | 8.9 | 0 | 0 | 426 | 88.2 | 483 | 63 | 43 | 8.9 |
Mycoplasma penetrans HF-2 | 33 | 3.17 | 364 | 35 | 258 | 24.81 | 8 | 0.77 | 377 | 36.25 | 1040 | 66 | 266 | 25.58 |
Mycoplasma pneumoniae M129 | 2 | 0.29 | 80 | 11.58 | 149 | 21.56 | 23 | 3.33 | 437 | 63.24 | 691 | 62 | 172 | 24.89 |
Mycoplasma pulmonis UAB CTIP | 2 | 0.25 | 364 | 46.37 | 115 | 14.65 | 14 | 1.78 | 290 | 36.94 | 785 | 67 | 129 | 16.43 |
Neisseria meningitidis MC58 | 62 | 3.04 | 247 | 12.13 | 298 | 14.63 | 128 | 6.28 | 1302 | 63.92 | 2037 | 27 | 426 | 20.91 |
Neisseria meningitidis Z2491 | 89 | 4.3 | 256 | 12.37 | 303 | 14.64 | 86 | 4.15 | 1336 | 64.54 | 2070 | 26 | 389 | 18.79 |
Nitrosomonas europaea ATCC19718 | 173 | 7.02 | 670 | 27.19 | 435 | 17.65 | 30 | 1.22 | 1156 | 46.92 | 2464 | 29 | 465 | 18.87 |
Nostoc sp. PCC 7120 | 123 | 2.29 | 1940 | 36.06 | 1442 | 26.8 | 100 | 1.86 | 1775 | 32.99 | 5380 | 50 | 1542 | 28.66 |
Oceanobacillus iheyensis HTE831 | 69 | 1.96 | 746 | 21.21 | 1011 | 28.74 | 71 | 2.02 | 1621 | 46.08 | 3518 | 78 | 1082 | 30.76 |
Pasteurella multocida PM70 | 30 | 1.49 | 211 | 10.48 | 434 | 21.55 | 23 | 1.14 | 1316 | 65.34 | 2014 | 12 | 457 | 22.69 |
Pseudomonas aeruginosa PAO1 | 106 | 1.9 | 832 | 14.92 | 1958 | 35.1 | 175 | 3.14 | 2507 | 44.94 | 5578 | 24 | 2133 | 38.24 |
Pseudomonas putida KT2440 | 188 | 3.5 | 836 | 15.57 | 1829 | 34.05 | 148 | 2.76 | 2370 | 44.13 | 5371 | 23 | 1977 | 36.81 |
Pseudomonas syringae DC3000 | 308 | 5.61 | 1038 | 18.92 | 1571 | 28.64 | 188 | 3.43 | 2381 | 43.4 | 5486 | 22 | 1759 | 32.06 |
Ralstonia solanacearum GMI1000 | 206 | 4.02 | 1459 | 28.48 | 1432 | 27.95 | 262 | 5.11 | 1764 | 34.43 | 5123 | 28 | 1694 | 33.07 |
Rickettsia conorii Malish 7 | 10 | 0.73 | 555 | 40.31 | 96 | 6.97 | 0 | 0 | 716 | 52 | 1377 | 35 | 96 | 6.97 |
Rickettsia prowazekii Madrid E | 10 | 1.19 | 47 | 5.62 | 87 | 10.39 | 0 | 0 | 693 | 82.8 | 837 | 34 | 87 | 10.39 |
Salmonella enterica str. CT18 | 375 | 8.51 | 32 | 0.73 | 1197 | 27.16 | 138 | 3.13 | 2666 | 60.48 | 4408 | 9 | 1335 | 30.29 |
Salmonella enterica subsp. enterica serovar Typhi Ty2 | 317 | 7.3 | 47 | 1.08 | 1210 | 27.85 | 99 | 2.28 | 2671 | 61.49 | 4344 | 8 | 1309 | 30.13 |
Salmonella typhimurium LT2 | 304 | 6.86 | 176 | 3.97 | 1277 | 28.8 | 204 | 4.6 | 2473 | 55.77 | 4434 | 7 | 1481 | 33.4 |
Shewanella oneidensis MR-1 | 271 | 5.82 | 1585 | 34.03 | 888 | 19.07 | 72 | 1.55 | 1841 | 39.53 | 4657 | 21 | 960 | 20.61 |
Shigella flexneri 2a str. 2457T | 734 | 17.95 | 88 | 2.15 | 1088 | 26.61 | 22 | 0.54 | 2156 | 52.74 | 4088 | 3 | 1110 | 27.15 |
Shigella flexneri 2a str. 301 | 775 | 18.44 | 56 | 1.33 | 1156 | 27.51 | 26 | 0.62 | 2189 | 52.09 | 4202 | 1 | 1182 | 28.13 |
Sinorhizobium meliloti 1021 | 206 | 3.32 | 1112 | 17.9 | 2268 | 36.5 | 282 | 4.54 | 2345 | 37.74 | 6213 | 39 | 2550 | 41.04 |
Staphylococcus aureus Mu50 | 106 | 3.88 | 90 | 3.3 | 675 | 24.73 | 98 | 3.59 | 1761 | 64.51 | 2730 | 70 | 773 | 28.32 |
Staphylococcus aureus MW2 | 74 | 2.79 | 153 | 5.77 | 680 | 25.65 | 58 | 2.19 | 1686 | 63.6 | 2651 | 69 | 738 | 27.84 |
Staphylococcus aureus N315 | 98 | 3.76 | 19 | 0.73 | 656 | 25.14 | 82 | 3.14 | 1754 | 67.23 | 2609 | 68 | 738 | 28.29 |
Staphylococcus epidermidis ATCC12228 | 82 | 3.37 | 381 | 15.65 | 531 | 21.81 | 80 | 3.29 | 1361 | 55.89 | 2435 | 71 | 611 | 25.09 |
Streptococcus agalactiae NEM316 | 55 | 2.6 | 98 | 4.63 | 476 | 22.51 | 197 | 9.31 | 1289 | 60.95 | 2115 | 89 | 673 | 31.82 |
Streptococcus galactiae 2603 | 139 | 6.5 | 197 | 9.21 | 470 | 21.96 | 39 | 1.82 | 1295 | 60.51 | 2140 | 90 | 509 | 23.79 |
Streptococcus mutans UA159 | 69 | 3.49 | 405 | 20.51 | 375 | 18.99 | 39 | 1.97 | 1087 | 55.04 | 1975 | 84 | 414 | 20.96 |
Streptococcus pneumoniae R6 | 116 | 5.64 | 174 | 8.47 | 448 | 21.8 | 38 | 1.85 | 1279 | 62.24 | 2055 | 83 | 486 | 23.65 |
Streptococcus pneumoniae TIGR4 | 86 | 4.08 | 237 | 11.25 | 464 | 22.03 | 40 | 1.9 | 1279 | 60.73 | 2106 | 82 | 504 | 23.93 |
Streptococcus pyogenes M1 GAS | 172 | 10.07 | 66 | 3.86 | 354 | 20.73 | 21 | 1.23 | 1095 | 64.11 | 1708 | 88 | 375 | 21.96 |
Streptococcus pyogenes MGAS315 | 368 | 19.61 | 35 | 1.86 | 345 | 18.38 | 27 | 1.44 | 1102 | 58.71 | 1877 | 87 | 372 | 19.82 |
Streptococcus pyogenes MGAS8232 | 310 | 16.69 | 64 | 3.45 | 356 | 19.17 | 23 | 1.24 | 1104 | 59.45 | 1857 | 85 | 379 | 20.41 |
Streptococcus pyogenes SSI-1 | 356 | 19.03 | 40 | 2.14 | 343 | 18.33 | 29 | 1.55 | 1103 | 58.95 | 1871 | 86 | 372 | 19.88 |
Streptomyces avermitilis MA-4680 | 117 | 1.54 | 1734 | 22.84 | 2702 | 35.59 | 244 | 3.21 | 2796 | 36.82 | 7593 | 95 | 2946 | 38.8 |
Streptomyces coelicolor A3(2) | 115 | 1.48 | 1648 | 21.19 | 2827 | 36.34 | 379 | 4.87 | 2810 | 36.12 | 7779 | 94 | 3206 | 41.21 |
Synechocystis sp. PCC6803 | 121 | 3.81 | 743 | 23.42 | 663 | 20.9 | 20 | 0.63 | 1625 | 51.23 | 3172 | 49 | 683 | 21.53 |
Thermoanaerobacter tengcongensis | 82 | 3.15 | 767 | 29.5 | 584 | 22.46 | 74 | 2.85 | 1093 | 42.04 | 2600 | 105 | 658 | 25.31 |
Thermosynechococcus elongatus BP-1 | 87 | 3.51 | 512 | 20.66 | 446 | 18 | 12 | 0.48 | 1421 | 57.34 | 2478 | 51 | 458 | 18.48 |
Thermotoga maritima | 24 | 1.3 | 677 | 36.61 | 282 | 15.25 | 43 | 2.33 | 823 | 44.51 | 1849 | 106 | 325 | 17.58 |
Treponema pallidum | 10 | 0.96 | 535 | 51.59 | 93 | 8.97 | 12 | 1.16 | 387 | 37.32 | 1037 | 93 | 105 | 10.13 |
Tropheryma whipplei TW08/27 | 8 | 1.02 | 30 | 3.82 | 95 | 12.09 | 0 | 0 | 653 | 83.08 | 786 | 96 | 95 | 12.09 |
Tropheryma whipplei Twist | 8 | 0.99 | 52 | 6.41 | 94 | 11.59 | 0 | 0 | 657 | 81.01 | 811 | 97 | 94 | 11.59 |
Ureaplasma urealyticum | 9 | 1.46 | 260 | 42.14 | 66 | 10.7 | 6 | 0.97 | 276 | 44.73 | 617 | 65 | 72 | 11.67 |
Vibrio cholerae chromosome | 86 | 2.23 | 636 | 16.52 | 967 | 25.11 | 51 | 1.32 | 2111 | 54.82 | 3851 | 18 | 1018 | 26.43 |
Vibrio parahaemolyticus RIMD 2210633 | 79 | 1.62 | 916 | 18.82 | 1250 | 25.69 | 183 | 3.76 | 2438 | 50.1 | 4866 | 20 | 1433 | 29.45 |
Vibrio vulnificus CMCP6 | 110 | 2.42 | 702 | 15.47 | 1169 | 25.77 | 121 | 2.67 | 2435 | 53.67 | 4537 | 19 | 1290 | 28.43 |
Wigglesworthia brevipalpis | 11 | 1.78 | 47 | 7.62 | 51 | 8.27 | 6 | 0.97 | 502 | 81.36 | 617 | 14 | 57 | 9.24 |
Xanthomonas axonopodis pv. citri str. 306 | 156 | 3.61 | 522 | 12.09 | 1040 | 24.09 | 65 | 1.51 | 2535 | 58.71 | 4318 | 31 | 1105 | 25.59 |
Xanthomonas campestris pv. campestris str. ATCC 33913 | 192 | 4.59 | 387 | 9.24 | 1044 | 24.93 | 58 | 1.39 | 2506 | 59.85 | 4187 | 30 | 1102 | 26.32 |
Xylella fastidiosa 9a5c | 174 | 6.28 | 662 | 23.88 | 404 | 14.57 | 106 | 3.82 | 1426 | 51.44 | 2772 | 33 | 510 | 18.4 |
Xylella fastidiosa Temecula1 | 160 | 7.84 | 47 | 2.3 | 369 | 18.09 | 58 | 2.84 | 1406 | 68.92 | 2040 | 32 | 427 | 20.93 |
Yersinia pestis CO92 | 343 | 8.79 | 175 | 4.48 | 954 | 24.44 | 145 | 3.72 | 2286 | 58.57 | 3903 | 11 | 1099 | 28.16 |
Yersinia pestis KIM | 313 | 7.61 | 404 | 9.82 | 971 | 23.6 | 142 | 3.45 | 2284 | 55.52 | 4114 | 10 | 1113 | 27.05 |