MAGIC: access portal to a cross-platform gene expression compendium for maize.

To facilitate the exploration of publicly available Zea mays expression data, we constructed a maize expression compendium, making use of an integration methodology and a consistent probe to gene mapping based on the 5b.60 sequence release of Z. mays. The compendium is made available through a web portal MAGIC that hosts a variety of analysis tools to easily browse and analyze the data. Our compendium is different from previous initiatives in combining expression values across different experiments by providing a consistent gene annotation across different platforms.Availability and implementation: http://bioinformatics.intec.ugent.be/magic/



Fu, Q., Fierro, A.C., Meysman, P., Sanchez-Rodriguez, A., Vandepoele, K., Marchal, K., Engelen, K. (2014) MAGIC: access portal to a cross-platform gene expression compendium for maize. Bioinformatics 30(9):1316-8.









Contact:
VIB / UGent
Bioinformatics & Evolutionary Genomics
Technologiepark 927
B-9052 Gent
BELGIUM
+32 (0) 9 33 13807 (phone)
+32 (0) 9 33 13809 (fax)

Don't hesitate to contact the in case of problems with the website!

You are visiting an outdated page of the BEG/Van de Peer Lab site.

Not all pages have been ported, so these archived pages are still available.

Redirect to the new website?