Oryza sativa ssp. indica

Oryza sativa indica is a subspecies of the Oryza sativa (commonly known as rice) species. Rice is a major food staple of the world's population, and after the sequencing of the monot model species Oryza sativa japonica, BGI sequenced the indica variety. Both subspecies are of course highly similar in genomic content.

Publication:
A draft sequence of the rice genome (Oryza sativa L. ssp. indica). Science 296, 79-92 (2002)

Info and Links

Source 9311_BGF_2005
PLAZA identifier osaindica
NCBI link Oryza sativa ssp. indica
Mitochondrion DQ167399
Chloroplast AY522329

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Page 1 of 2972, showing 20 records out of 59430 total, starting on record 1, ending on 20

Gene Transcript Start Stop Strand Chr Type Gene family
OSINDICA_00G00010OSINDICA_00G00010.129703656-Scaffold019076coding HOM03M000029
OSINDICA_00G00020OSINDICA_00G00020.1213366-Scaffold019078coding HOM03M002082
OSINDICA_00G00030OSINDICA_00G00030.16341632+Scaffold019077coding HOM03M000034
OSINDICA_00G00040OSINDICA_00G00040.118533102-Scaffold019077coding HOM03M013018
OSINDICA_00G00050OSINDICA_00G00050.14871902-Scaffold028291coding HOM03M007832
OSINDICA_00G00060OSINDICA_00G00060.145715292-Supscaffold419coding HOM03M001973
OSINDICA_00G00070OSINDICA_00G00070.1731410574-Supscaffold419coding HOM03M000002
OSINDICA_00G00080OSINDICA_00G00080.12063381+Scaffold020362coding HOM03M006787
OSINDICA_00G00090OSINDICA_00G00090.116382420-Scaffold024518codingorphan gene
OSINDICA_00G00100OSINDICA_00G00100.124572960-Scaffold021774coding HOM03M009859
OSINDICA_00G00110OSINDICA_00G00110.125172990-Scaffold020364coding HOM03M004996
OSINDICA_00G00120OSINDICA_00G00120.1951177-Scaffold019070coding HOM03M003801
OSINDICA_00G00130OSINDICA_00G00130.114812801+Scaffold019070coding HOM03M003276
OSINDICA_00G00140OSINDICA_00G00140.133333761-Scaffold019070coding HOM03M009192
OSINDICA_00G00150OSINDICA_00G00150.118232921-Supscaffold417te
OSINDICA_00G00160OSINDICA_00G00160.1971710262+Supscaffold417coding HOM03M019537
OSINDICA_00G00170OSINDICA_00G00170.1791914-Supscaffold418coding HOM03M000146
OSINDICA_00G00180OSINDICA_00G00180.133044579-Supscaffold418te
OSINDICA_00G00190OSINDICA_00G00190.162609346+Supscaffold418te
OSINDICA_00G00200OSINDICA_00G00200.112942112+Scaffold028612coding HOM03M000610