rRNA secondary structure models
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The sequences are ordered according to the first 3 levels of the NCBI taxonomy. The first level corresponds to the superkingdom but subsequent levels are not neccessarily kingdom and phylum.
The Prokaryotic SSU rRNA model is in accordance with Van de Peer et al. (2000)
The Eukaryotic SSU rRNA model is in accordance with Wuyts et al. (2000)
| SSU rRNA secondary structure models | ||||
|---|---|---|---|---|
| NCBI taxonomy | species name | accession nr. | ||
| Archaea | Crenarchaeota | Sulfolobales | Sulfolobus acidocaldarius | D14876 |
| Euryarchaeota | Methanococcales | Methanococcus jannaschii | U67517 | |
| Eukaryota | Alveolata | Apicomplexa | Plasmodium vivax | U03079 |
| Ciliophora | Tetrahymena canadensis | M26359 | ||
| Dinophyceae | Gymnodinium breve | AF172714 | ||
| Fungi | Ascomycota | Saccharomyces cerevisiae | V01335 | |
| Basidiomycota | Coprinus cinereus | M92991 | ||
| Metazoa | Arthropoda | Daphnia pulex | AF014011 | |
| Loricera foveata | AF012503 | |||
| Platyhelminthes | Calicophoron calicophorum | L06566 | ||
| Rhodophyta | Florideophyceae | Palmaria palmata | X53500 | |
| stramenopiles | Bacillariophyta | Bacillaria paxillifer | M87325 | |
| Viridiplantae | Chlorophyta | Chlamydomonas reinhardtii | M32703 | |
| Embryophyta | Zea mays | K02202 | ||