Oryza sativa ssp. japonica

The rice genome was sequenced because of it's major importance in the world food industry and it's relatively small genome size. Since the first sequenced plant genome (Arabidopsis thalia) was a dicotylous plant it made sense to sequence a monocot next to have a broad taxonomix sampling. Unlike many of the recently sequenced genomes the sequencing has been done using a BAC-by-BAC approach a very costly a labour intensive procedure. But this yields a very high quality genome that can be assembled into chromosomes.

Publication:
The map-based sequence of the rice genome.

Info and Links

Source JGI v7.0
PLAZA identifier osa
NCBI link Oryza sativa ssp. japonica
Mitochondrion Not available
Chloroplast Not available

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Page 1 of 2110, showing 20 records out of 42189 total, starting on record 1, ending on 20

Gene Transcript Start Stop Strand Chr Type Gene family
LOC_Os01g51770LOC_Os01g51770.12977048129773245-Chr1coding HOM04M000507
LOC_Os01g19860LOC_Os01g19860.11126417011266136-Chr1coding HOM04M002140
LOC_Os01g25470LOC_Os01g25470.11444271714444896-Chr1coding HOM04M000261
LOC_Os01g04760LOC_Os01g04760.121627232162971-Chr1codingorphan gene
LOC_Os01g04660LOC_Os01g04660.120976772100391+Chr1coding HOM04M000824
LOC_Os01g45710LOC_Os01g45710.12595264125954080+Chr1codingorphan gene
LOC_Os01g39150LOC_Os01g39150.12203683022037585+Chr1coding HOM04M000094
LOC_Os01g27150LOC_Os01g27150.21513150015139267-Chr1coding HOM04M000392
LOC_Os01g29260LOC_Os01g29260.11640062916403593+Chr1coding HOM04M000506
LOC_Os01g31820LOC_Os01g31820.11743286217433638+Chr1codingorphan gene
LOC_Os01g56290LOC_Os01g56290.13242463332426449+Chr1coding HOM04M005895
LOC_Os01g72210LOC_Os01g72210.24187047141873654+Chr1coding HOM04M000308
LOC_Os01g53560LOC_Os01g53560.13075350930760952+Chr1coding HOM04M005270
LOC_Os01g12680LOC_Os01g12680.469913546993431+Chr1coding HOM04M000545
LOC_Os01g70000LOC_Os01g70000.14049405440495520+Chr1coding HOM04M017985
LOC_Os01g50320LOC_Os01g50320.12888555428890711+Chr1coding HOM04M005010
LOC_Os01g52760LOC_Os01g52760.13035182930353432+Chr1coding HOM04M006840
LOC_Os01g61720LOC_Os01g61720.33570986035712378-Chr1coding HOM04M000252
LOC_Os01g57066LOC_Os01g57066.13295731732962793+Chr1coding HOM04M002201
LOC_Os01g55470LOC_Os01g55470.13195749931961019-Chr1coding HOM04M000118