Gene: Zosma44g01520 (Zostera marina)

Overview top

Gene Identifier
Zosma44g01520
Transcript Identifier
Zosma44g01520.1
Gene Type
Coding gene
Location
scaffold_44 : 743242-745729 : negative

Family

Gene family
HOM04M001404
(105 genes in 29 species)
specific family
Subfamily
ORTHO04M003470
(55 genes in 29 species)
specific family

Descriptions

Description
Asparagine--tRNA ligase

Identifiers

Type Value
idZosma44g01520.v2.2
pacid33173211
tidZosma44g01520.1.v2.2
tidZosma44g01520.1

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006421 IEAInterProasparaginyl-tRNA aminoacylation
GO:0006418 IEAInterProtRNA aminoacylation for protein translation
GO:0046686 IEAPLAZA Integrative Orthologyresponse to cadmium ionAT5G56680
GO:0009793 IEAPLAZA Integrative Orthologyembryo development ending in seed dormancyAT5G56680

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0000166 IEAInterPronucleotide binding
GO:0004816 IEAInterProasparagine-tRNA ligase activity
GO:0005524 IEAInterProATP binding
GO:0004812 IEAInterProaminoacyl-tRNA ligase activity
GO:0003676 IEAInterPronucleic acid binding

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005737 IEAInterProcytoplasm
GO:0005829 IEAPLAZA Integrative OrthologycytosolAT5G56680
GO:0005739 IEAPLAZA Integrative OrthologymitochondrionAT3G07420
GO:0009507 IEAPLAZA Integrative OrthologychloroplastAT3G07420

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR004522Asparagine-tRNA ligase
IPR002312Aspartyl/Asparaginyl-tRNA synthetase, class IIb
IPR004364Aminoacyl-tRNA synthetase, class II (D/K/N)
IPR004365OB-fold nucleic acid binding domain, AA-tRNA synthetase-type
IPR000738WHEP-TRS domain
IPR006195Aminoacyl-tRNA synthetase, class II
IPR012340Nucleic acid-binding, OB-fold

Mapman id Description
17.2.3.Protein biosynthesis.aminoacyl-tRNA synthetase activities.asparagine-tRNA ligase
No SignalP domains detected for this gene.