Gene: Zm00001d039860 (Zea mays)

Overview top

Gene Identifier
Zm00001d039860
Transcript Identifier
Zm00001d039860_T004
Gene Type
Coding gene
Location
3 : 16958701-16979664 : negative

Family

Gene family
HOM04M002820
(58 genes in 29 species)
specific family

Descriptions

Description
E3 ubiquitin-protein ligase PRT6

Identifiers

Type Value
pidZm00001d039860_P004
tidZm00001d039860_T004
V3_identifierGRMZM2G438938
V3_identifierGRMZM2G541193

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0010025 IEAPLAZA Integrative Orthologywax biosynthetic processAT5G02310
GO:0006511 IEAPLAZA Integrative Orthologyubiquitin-dependent protein catabolic processAT5G02310
GO:0010029 IEAPLAZA Integrative Orthologyregulation of seed germinationAT5G02310
GO:0009737 IEAPLAZA Integrative Orthologyresponse to abscisic acidAT5G02310
GO:0006723 IEAPLAZA Integrative Orthologycuticle hydrocarbon biosynthetic processAT5G02310
GO:0050994 IEAPLAZA Integrative Orthologyregulation of lipid catabolic processAT5G02310

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0008270 IEAInterProzinc ion binding
GO:0004842 IEAPLAZA Integrative Orthologyubiquitin-protein transferase activityAT5G02310

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
Show redundant parents:  
 
InterPro Description
IPR013083Zinc finger, RING/FYVE/PHD-type
IPR003126Zinc finger, UBR-type
IPR011991Winged helix-turn-helix DNA-binding domain

Mapman id Description
19.2.1.2.2.1.Protein homeostasis.ubiquitin-proteasome system.N-degron pathways.Arg/N-degron pathway.Arg/N-recognin activities.type-I-residues E3 ubiquitin ligase (PRT6)
No SignalP domains detected for this gene.