Gene: Zm00001d003813 (Zea mays)

Overview top

Gene Identifier
Zm00001d003813
Transcript Identifier
Zm00001d003813_T001
Gene Type
Coding gene
Location
2 : 60626397-60637075 : negative

Family

Gene family
HOM04M000721
(181 genes in 29 species)
specific family
Subfamily
ORTHO04M000710
(155 genes in 29 species)
specific family

Descriptions

Description
histone deacetylase

Identifiers

Type Value
pidZm00001d003813_P001
tidZm00001d003813_T001
V3_identifierGRMZM2G119703

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0016575 IEAInterProhistone deacetylation
GO:1990619 IEAPLAZA Integrative Orthologyhistone H3-K9 deacetylationAT3G44680
GO:1900055 IEAPLAZA Integrative Orthologyregulation of leaf senescenceAT3G44680
GO:0010187 IEAPLAZA Integrative Orthologynegative regulation of seed germinationAT3G44680

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0004407 IEAInterProhistone deacetylase activity
GO:0043565 IEAPLAZA Integrative Orthologysequence-specific DNA bindingAT3G44680
GO:0005515 IEAPLAZA Integrative Orthologyprotein bindingAT3G44680

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
Show redundant parents:  
 
InterPro Description
IPR023801Histone deacetylase domain
IPR000286Histone deacetylase superfamily
IPR003084Histone deacetylase

Mapman id Description
12.3.2.1.1.Chromatin organisation.histone modifications.histone deacetylation.HD1 histone deacetylase family.class-I histone deacetylase
12.3.2.1.4.1.Chromatin organisation.histone modifications.histone deacetylation.HD1 histone deacetylase family.HDA9-PWR deacetylation complex.component HDA9
No SignalP domains detected for this gene.