Gene: Zjn_sc00030.1.g02450.1.am.mkhc (Zoysia japonica ssp. nagirizaki)

Overview top

Gene Identifier
Zjn_sc00030.1.g02450.1.am.mkhc
Transcript Identifier
Zjn_sc00030.1.g02450.1.am.mkhc
Gene Type
Coding gene
Location
Zjn_sc00030.1 : 2136596-2139885 : positive

Family

Gene family
HOM04M001291
(112 genes in 29 species)
specific family
Duplication type
Tandem duplicate   and   Block duplicate

Descriptions

No default description found ...
Description of best ortholog(s):

Identifiers

Type Value

Toolbox

Explore

Create

View

Browse

 

Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006568 IEAInterProtryptophan metabolic process
GO:0008152 IEAInterPrometabolic process
GO:0009640 IEAPLAZA Integrative OrthologyphotomorphogenesisAT3G54640
GO:0009630 IEAPLAZA Integrative OrthologygravitropismAT3G54640
GO:0042742 IEAPLAZA Integrative Orthologydefense response to bacteriumAT3G54640
GO:0009735 IEAPLAZA Integrative Orthologyresponse to cytokininAT3G54640
GO:0052544 IEAPLAZA Integrative Orthologydefense response by callose deposition in cell wallAT3G54640
GO:0000162 IEAPLAZA Integrative Orthologytryptophan biosynthetic processAT4G02610
GO:0050832 IEAPLAZA Integrative Orthologydefense response to fungusAT3G54640

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0004834 IEAInterProtryptophan synthase activity
GO:0003824 IEAInterProcatalytic activity
GO:0005509 IEAPLAZA Integrative Orthologycalcium ion bindingAT3G54640
GO:0033984 IEAPLAZA Integrative Orthologyindole-3-glycerol-phosphate lyase activityAT4G02610

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0009570 IEAPLAZA Integrative Orthologychloroplast stromaAT3G54640
GO:0005773 IEAPLAZA Integrative OrthologyvacuoleAT3G54640
GO:0009535 IEAPLAZA Integrative Orthologychloroplast thylakoid membraneAT3G54640
GO:0005777 IEAPLAZA Integrative OrthologyperoxisomeAT3G54640
GO:0009507 IEAPLAZA Integrative OrthologychloroplastAT4G02610
GO:0005737 IEAPLAZA Integrative OrthologycytoplasmAT4G02610

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
Show redundant parents:  
 
InterPro Description
IPR002028Tryptophan synthase, alpha chain
IPR013785Aldolase-type TIM barrel
IPR018204Tryptophan synthase, alpha chain, active site
IPR011060Ribulose-phosphate binding barrel

Mapman id Description
4.1.5.3.5.1.Amino acid metabolism.biosynthesis.shikimate family.tryptophan.tryptophan synthase heterodimer.subunit alpha
No SignalP domains detected for this gene.