PLAZA 4.0 Monocots gene overview : TAE26375G002

Gene: TAE26375G002 (Triticum aestivum)

Overview

Gene Identifier: TAE26375G002
Transcript Identifier: TAE26375G002.01
Gene Type: Coding gene
Location: TGACv1_scaffold_290435_4AL : 41271-43715 : positive

Family

Gene family: HOM04M004047
(44 genes in 29 species)
specific family

Descriptions

Description: 3-phosphoshikimate 1-carboxyvinyltransferase

Identifiers

Type	Value
id	TRIAE_CS42_4AL_TGACv1_290435_AA0985500
tid	TRIAE_CS42_4AL_TGACv1_290435_AA0985500.1

Toolbox

Explore

...the colinearity of this gene with other genomes.
...the local gene organization for homologous genes.
...the phylogenetic tree of the homologous gene family.
...the orthologs using the Integrative Orthology Viewer.
...the conserved binding sites (upstream/downstream,intron)

Create

...a custom phylogenetic tree using this gene as seed.

View

Browse

...the gene in IGV.js, a genome browser

Biological Process

GO term	Evidence(s)	Provider	Description	Source
GO:0009073	IEA	InterPro	aromatic amino acid family biosynthetic process
GO:0018920	IEA	PLAZA Integrative Orthology	glyphosate metabolic process	AT1G48860
GO:0033587	IEA	PLAZA Tree-based Orthology	shikimate biosynthetic process	LOC_Os06g04280
GO:0009423	IEA	PLAZA Integrative Orthology	chorismate biosynthetic process	AT2G45300

Molecular Function

GO term	Evidence(s)	Provider	Description	Source
GO:0003866	IEA	InterPro	3-phosphoshikimate 1-carboxyvinyltransferase activity
GO:0016765	IEA	InterPro	transferase activity, transferring alkyl or aryl (other than methyl) groups
GO:0003824	IEA	InterPro	catalytic activity

Cellular Component

GO term	Evidence(s)	Provider	Description	Source
GO:0009536	IEA	PLAZA Tree-based Orthology	plastid	LOC_Os06g04280
GO:0009507	IEA	PLAZA Integrative Orthology	chloroplast	AT1G48860
GO:0009570	IEA	PLAZA Integrative Orthology	chloroplast stroma	AT2G45300

Color Legend

Experimental Evidence

Electronic Evidence

Computational Reviewed Evidence

InterPro	Description
IPR006264	3-phosphoshikimate 1-carboxyvinyltransferase
IPR001986	Enolpyruvate transferase domain
IPR023193	3-phosphoshikimate 1-carboxyvinyltransferase, conserved site
IPR013792	RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta

Mapman id	Description
4.1.5.1.5	.Amino acid metabolism.biosynthesis.shikimate family.shikimate pathway.5-enolpyruvyl-shikimate 3-phosphate (EPSP) synthase

No SignalP domains detected for this gene.