PLAZA 4.0 Monocots gene overview : TAE01844G001

Gene: TAE01844G001 (Triticum aestivum)

Overview

Gene Identifier: TAE01844G001
Transcript Identifier: TAE01844G001.01
Gene Type: Coding gene
Location: TGACv1_scaffold_434256_5DL : 44516-47774 : negative

Family

Gene family: HOM04M000023
(1938 genes in 28 species)
specific family
Subfamily: ORTHO04M000009
(1547 genes in 27 species)
specific family

Descriptions

No default description found ...
Description of best ortholog(s):

Identifiers

Type	Value
id	TRIAE_CS42_5DL_TGACv1_434256_AA1432780
tid	TRIAE_CS42_5DL_TGACv1_434256_AA1432780.1

Toolbox

Explore

...the colinearity of this gene with other genomes.
...the local gene organization for homologous genes.
...the phylogenetic tree of the homologous gene family.
...the orthologs using the Integrative Orthology Viewer.
...the conserved binding sites (upstream/downstream,intron)

Create

...a custom phylogenetic tree using this gene as seed.

View

...sequences.
...the multiple sequence alignment of the gene family with BioJS
...BLAST hits against the PLAZA database.
...BLAST hits against NCBIs protein database.
...all colinear gene pairs.

Browse

...the gene in IGV.js, a genome browser

Biological Process

GO term	Evidence(s)	Provider	Description	Source
GO:0006508	IEA	InterPro	proteolysis
GO:0009682	IEA	PLAZA Integrative Orthology	induced systemic resistance	AT1G32960
GO:0009860	IEA	PLAZA Integrative Orthology	pollen tube growth	AT4G21323
GO:0009408	IEA	PLAZA Integrative Orthology	response to heat	AT4G21326
GO:0010286	IEA	PLAZA Integrative Orthology	heat acclimation	AT4G21326
GO:0010608	IEA	PLAZA Integrative Orthology	posttranscriptional regulation of gene expression	AT4G21326

Molecular Function

GO term	Evidence(s)	Provider	Description	Source
GO:0004252	IEA	InterPro	serine-type endopeptidase activity

Cellular Component

GO term	Evidence(s)	Provider	Description	Source
GO:0009505	IEA	PLAZA Integrative Orthology	plant-type cell wall	AT4G21630
GO:0031012	IEA	PLAZA Integrative Orthology	extracellular matrix	AT1G32960
GO:0005618	IEA	PLAZA Integrative Orthology	cell wall	AT1G32940
GO:0048046	IEA	PLAZA Integrative Orthology	apoplast	AT1G32960

Color Legend

Experimental Evidence

Electronic Evidence

Computational Reviewed Evidence

InterPro	Description
IPR034197	Cucumisin-like catalytic domain
IPR000209	Peptidase S8/S53 domain
IPR010259	Peptidase S8 propeptide/proteinase inhibitor I9
IPR015500	Peptidase S8, subtilisin-related
IPR023828	Peptidase S8, subtilisin, Ser-active site

Mapman id	Description
19.4.2.1.3	.Protein homeostasis.proteolysis.serine-type peptidase activities.S8-class protease (subtilisin) families.protease (SBT3)

No SignalP domains detected for this gene.