PLAZA 4.0 Monocots gene overview : TAE00006G001

Gene: TAE00006G001 (Triticum aestivum)

Overview

Gene Identifier: TAE00006G001
Transcript Identifier: TAE00006G001.01
Gene Type: Coding gene
Location: TGACv1_scaffold_061353_1DL : 42757-45294 : positive

Family

Gene family: HOM04M000023
(1938 genes in 28 species)
specific family
Subfamily: ORTHO04M000009
(1547 genes in 27 species)
specific family

Descriptions

No default description found ...
Description of best ortholog(s):

Identifiers

Type	Value
id	TRIAE_CS42_1DL_TGACv1_061353_AA0192910
tid	TRIAE_CS42_1DL_TGACv1_061353_AA0192910.1

Toolbox

Explore

...the colinearity of this gene with other genomes.
...the local gene organization for homologous genes.
...the phylogenetic tree of the homologous gene family.
...the orthologs using the Integrative Orthology Viewer.
...the conserved binding sites (upstream/downstream,intron)

Create

...a custom phylogenetic tree using this gene as seed.

View

...sequences.
...the multiple sequence alignment of the gene family with BioJS
...BLAST hits against the PLAZA database.
...BLAST hits against NCBIs protein database.
...all colinear gene pairs.

Browse

...the gene in IGV.js, a genome browser

Biological Process

GO term	Evidence(s)	Provider	Description	Source
GO:0006508	IEA	InterPro	proteolysis

Molecular Function

GO term	Evidence(s)	Provider	Description	Source
GO:0004252	IEA	InterPro	serine-type endopeptidase activity

Color Legend

Experimental Evidence

Electronic Evidence

Computational Reviewed Evidence

InterPro	Description
IPR034197	Cucumisin-like catalytic domain
IPR010259	Peptidase S8 propeptide/proteinase inhibitor I9
IPR013783	Immunoglobulin-like fold
IPR000209	Peptidase S8/S53 domain
IPR015500	Peptidase S8, subtilisin-related
IPR023828	Peptidase S8, subtilisin, Ser-active site
IPR009020	Protease propeptides/proteinase inhibitor I9

Mapman id	Description
19.4.2.1.1	.Protein homeostasis.proteolysis.serine-type peptidase activities.S8-class protease (subtilisin) families.protease (SBT1)

No SignalP domains detected for this gene.