Gene: Spipo9G0033100 (Spirodela polyrhiza)

Overview top

Gene Identifier
Spipo9G0033100
Transcript Identifier
Spipo9G0033100
Gene Type
Coding gene
Location
pseudo9 : 2252515-2256550 : negative

Family

Gene family
HOM04M001820
(84 genes in 26 species)
specific family

Descriptions

Description
Histone deacetylase

Identifiers

Type Value
idSpipo9G0033100.v2
pacid31513950
tidSpipo9G0033100.v2.290

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0030422 IEAPLAZA Integrative Orthologyproduction of siRNA involved in RNA interferenceAT2G27840
GO:0045892 IEAPLAZA Integrative Orthologynegative regulation of transcription, DNA-templatedAT5G03740
GO:0009737 IEAPLAZA Integrative Orthologyresponse to abscisic acidAT5G03740
GO:0009414 IEAPLAZA Integrative Orthologyresponse to water deprivationAT5G03740
GO:0009944 IEAPLAZA Integrative Orthologypolarity specification of adaxial/abaxial axisAT3G44750
GO:0009651 IEAPLAZA Integrative Orthologyresponse to salt stressAT5G03740
GO:0010162 IEAPLAZA Integrative Orthologyseed dormancy processAT3G44750
GO:0009294 IEAPLAZA Integrative OrthologyDNA mediated transformationAT3G44750

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0003676 IEAPLAZA Homology (enrichment)nucleic acid binding
GO:0043565 IEAPLAZA Integrative Orthologysequence-specific DNA bindingAT5G03740

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005829 IEAPLAZA Integrative OrthologycytosolAT5G22650
GO:0005739 IEAPLAZA Integrative OrthologymitochondrionAT5G22650
GO:0005618 IEAPLAZA Integrative Orthologycell wallAT5G22650
GO:0005774 IEAPLAZA Integrative Orthologyvacuolar membraneAT5G22650
GO:0005730 IEAPLAZA Integrative OrthologynucleolusAT5G03740

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Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
Show redundant parents:  
 
No InterPro domains detected for this gene.
Mapman id Description
12.3.2.2.Chromatin organisation.histone modifications.histone deacetylation.HD2 histone deacetylase
No SignalP domains detected for this gene.