Gene: Spipo7G0022000 (Spirodela polyrhiza)

Overview top

Gene Identifier
Spipo7G0022000
Transcript Identifier
Spipo7G0022000
Gene Type
Coding gene
Location
pseudo7 : 2060380-2061060 : negative

Family

Gene family
HOM04M000093
(903 genes in 29 species)
specific family
Subfamily
ORTHO04M000040
(877 genes in 29 species)
specific family

Descriptions

Description
Dof zinc finger protein 6

Identifiers

Type Value
idSpipo7G0022000.v2
pacid31506735
tidSpipo7G0022000.v2.290

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006355 IEAInterProregulation of transcription, DNA-templated
GO:0048510 IEAPLAZA Integrative Orthologyregulation of timing of transition from vegetative to reproductive phaseAT5G62430
GO:0048825 IEAPLAZA Integrative Orthologycotyledon developmentAT4G21030
GO:2000032 IEAPLAZA Integrative Orthologyregulation of secondary shoot formationAT4G21030
GO:0010214 IEAPLAZA Integrative Orthologyseed coat developmentAT1G29160
GO:0045893 IEAPLAZA Integrative Orthologypositive regulation of transcription, DNA-templatedAT4G21030
GO:0045892 IEAPLAZA Integrative Orthologynegative regulation of transcription, DNA-templatedAT5G62430
GO:0009704 IEAPLAZA Integrative Orthologyde-etiolationAT5G62430
GO:0008219 IEAPLAZA Integrative Orthologycell deathAT5G62430
GO:0009414 IEAPLAZA Integrative Orthologyresponse to water deprivationAT3G47500
GO:0009658 IEAPLAZA Integrative Orthologychloroplast organizationAT5G62430
GO:0048359 IEAPLAZA Integrative Orthologymucilage metabolic process involved in seed coat developmentAT4G21030
GO:1902455 IEAPLAZA Integrative Orthologynegative regulation of stem cell population maintenanceAT2G34140
GO:1904216 IEAPLAZA Integrative Orthologypositive regulation of protein import into chloroplast stromaAT5G62430
GO:0009793 IEAPLAZA Integrative Orthologyembryo development ending in seed dormancyAT5G62430

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0003677 IEAInterProDNA binding
GO:0005515 IEAPLAZA Integrative Orthologyprotein bindingAT5G62430
GO:0044183 IEAPLAZA Integrative Orthologyprotein binding involved in protein foldingAT5G62430
GO:0003700 IEAPLAZA Integrative Orthologytranscription factor activity, sequence-specific DNA bindingAT5G62430
GO:0043565 IEAPLAZA Integrative Orthologysequence-specific DNA bindingAT1G64620
GO:0044212 IEAPLAZA Integrative Orthologytranscription regulatory region DNA bindingAT1G29160

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0055035 IEAPLAZA Integrative Orthologyplastid thylakoid membraneAT5G62430
GO:0005739 IEAPLAZA Integrative OrthologymitochondrionAT5G62430
GO:0005634 IEAPLAZA Integrative OrthologynucleusAT5G62430
GO:0005886 IEAPLAZA Integrative Orthologyplasma membraneAT3G47500
GO:0009941 IEAPLAZA Integrative Orthologychloroplast envelopeAT5G62430
GO:0005768 IEAPLAZA Integrative OrthologyendosomeAT3G47500
GO:0005802 IEAPLAZA Integrative Orthologytrans-Golgi networkAT3G47500
GO:0009507 IEAPLAZA Integrative OrthologychloroplastAT5G62430
GO:0009706 IEAPLAZA Integrative Orthologychloroplast inner membraneAT5G62430
GO:0009536 IEAPLAZA Integrative OrthologyplastidAT5G62430
GO:0005794 IEAPLAZA Integrative OrthologyGolgi apparatusAT3G47500
GO:0009534 IEAPLAZA Integrative Orthologychloroplast thylakoidAT5G62430
GO:0009570 IEAPLAZA Integrative Orthologychloroplast stromaAT5G62430

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Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR003851Zinc finger, Dof-type

Mapman id Description
15.5.1.5.RNA biosynthesis.transcriptional regulation.C2C2 transcription factor superfamily.transcription factor (DOF)
No SignalP domains detected for this gene.