Gene: Spipo6G0065000 (Spirodela polyrhiza)

Overview top

Gene Identifier
Spipo6G0065000
Transcript Identifier
Spipo6G0065000
Gene Type
Coding gene
Location
pseudo6 : 5595793-5597703 : negative

Family

Gene family
HOM04M000305
(342 genes in 29 species)
specific family
Subfamily
ORTHO04M000824
(139 genes in 25 species)
specific family

Descriptions

Description
Zinc finger CCCH domain-containing protein

Identifiers

Type Value
idSpipo6G0065000.v2
pacid31506078
tidSpipo6G0065000.v2.290

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0010200 IEAPLAZA Integrative Orthologyresponse to chitinAT3G55980
GO:0050832 IEAPLAZA Integrative Orthologydefense response to fungusAT2G40140
GO:0006355 IEAPLAZA Integrative Orthologyregulation of transcription, DNA-templatedAT5G58620
GO:0009409 IEAPLAZA Integrative Orthologyresponse to coldAT2G40140

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0046872 IEAInterPrometal ion binding
GO:0005515 IEAInterProprotein binding

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR020683Ankyrin repeat-containing domain
IPR000571Zinc finger, CCCH-type
IPR002110Ankyrin repeat

Mapman id Description
16.9.2.RNA processing.mRNA sequestration.mRNA-binding regulatory factor (TZF)
No SignalP domains detected for this gene.