Gene: Spipo4G0015700 (Spirodela polyrhiza)

Overview top

Gene Identifier
Spipo4G0015700
Transcript Identifier
Spipo4G0015700
Gene Type
Coding gene
Location
pseudo4 : 1518595-1524494 : negative

Family

Gene family
HOM04M000198
(472 genes in 28 species)
specific family
Subfamily
ORTHO04M000234
(309 genes in 28 species)
specific family

Descriptions

Description
cyclic nucleotide-gated channel 18

Identifiers

Type Value
idSpipo4G0015700.v2
pacid31503769
tidSpipo4G0015700.v2.290

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006811 IEAInterProion transport
GO:0055085 IEAInterProtransmembrane transport
GO:0006813 IEAInterPropotassium ion transport
GO:0006874 IEAPLAZA Integrative Orthologycellular calcium ion homeostasisAT5G14870
GO:0070588 IEAPLAZA Integrative Orthologycalcium ion transmembrane transportAT5G14870
GO:0009860 IEAPLAZA Integrative Orthologypollen tube growthAT5G14870

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0005216 IEAInterProion channel activity
GO:0005249 IEAInterProvoltage-gated potassium channel activity
GO:0005262 IEAPLAZA Integrative Orthologycalcium channel activityAT5G14870

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0016020 IEAInterPromembrane
GO:0016324 IEAPLAZA Integrative Orthologyapical plasma membraneAT5G14870

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
Show redundant parents:  
 
InterPro Description
IPR014710RmlC-like jelly roll fold
IPR005821Ion transport domain
IPR000595Cyclic nucleotide-binding domain
IPR003938Potassium channel, voltage-dependent, EAG/ELK/ERG
IPR018490Cyclic nucleotide-binding-like

Mapman id Description
24.3.2.4.Solute transport.channels.VIC superfamily.cyclic nucleotide-gated cation channel (CNGC)
No SignalP domains detected for this gene.