Gene: Spipo1G0085000 (Spirodela polyrhiza)

Overview top

Gene Identifier
Spipo1G0085000
Transcript Identifier
Spipo1G0085000
Gene Type
Coding gene
Location
pseudo1 : 5319601-5320590 : positive

Family

Gene family
HOM04M000249
(390 genes in 27 species)
specific family
Subfamily
ORTHO04M000925
(130 genes in 25 species)
specific family
Duplication type
Block duplicate

Descriptions

Description
Auxin response factor 24

Identifiers

Type Value
idSpipo1G0085000.v2
pacid31521081
tidSpipo1G0085000.v2.290

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0010358 IEAPLAZA Integrative Orthologyleaf shapingAT5G06250
GO:0048366 IEAPLAZA Integrative Orthologyleaf developmentAT3G61970
GO:0019760 IEAPLAZA Integrative Orthologyglucosinolate metabolic processAT3G11580
GO:0009908 IEAPLAZA Integrative Orthologyflower developmentAT3G61970
GO:0045892 IEAPLAZA Integrative Orthologynegative regulation of transcription, DNA-templatedAT2G36080
GO:0048573 IEAPLAZA Tree-based Orthologyphotoperiodism, floweringAT1G25560
GO:0048527 IEAPLAZA Tree-based Orthologylateral root developmentAT1G13260
GO:0009910 IEAPLAZA Tree-based Orthologynegative regulation of flower developmentAT1G13260
GO:0009741 IEAPLAZA Tree-based Orthologyresponse to brassinosteroidAT1G13260
GO:0006355 IEAPLAZA Integrative Orthologyregulation of transcription, DNA-templatedAT5G06250
GO:0080113 IEAPLAZA Integrative Orthologyregulation of seed growthAT3G11580
GO:0010073 IEAPLAZA Integrative Orthologymeristem maintenanceAT5G06250
GO:0080167 IEAPLAZA Integrative Orthologyresponse to karrikinAT2G36080
GO:1901371 IEAPLAZA Integrative Orthologyregulation of leaf morphogenesisAT3G61970

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0003677 IEAInterProDNA binding
GO:0003700 IEAPLAZA Integrative Orthologytranscription factor activity, sequence-specific DNA bindingAT3G11580
GO:0043565 IEAPLAZA Integrative Orthologysequence-specific DNA bindingAT3G11580
GO:0044212 IEAPLAZA Integrative Orthologytranscription regulatory region DNA bindingAT3G11580

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005634 IEAPLAZA Integrative OrthologynucleusAT3G11580

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
Show redundant parents:  
 
InterPro Description
IPR003340B3 DNA binding domain
IPR015300DNA-binding pseudobarrel domain

Mapman id Description
15.5.5.3.RNA biosynthesis.transcriptional regulation.B3 transcription factor superfamily.transcription factor (RAV/NGATHA)
No SignalP domains detected for this gene.