Gene: Spipo1G0060200 (Spirodela polyrhiza)

Overview top

Gene Identifier
Spipo1G0060200
Transcript Identifier
Spipo1G0060200
Gene Type
Coding gene
Location
pseudo1 : 3841536-3842518 : negative

Family

Gene family
HOM04M000014
(2446 genes in 27 species)
specific family
Subfamily
ORTHO04M000022
(1115 genes in 27 species)
specific family
Duplication type
Block duplicate

Descriptions

Description
NAC domain protein,

Identifiers

Type Value
idSpipo1G0060200.v2
pacid31521243
tidSpipo1G0060200.v2.290

Toolbox

Explore

Create

View

Browse

 

Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006355 IEAInterProregulation of transcription, DNA-templated
GO:0010200 IEAPLAZA Integrative Orthologyresponse to chitinAT2G18060
GO:1901348 IEAPLAZA Integrative Orthologypositive regulation of secondary cell wall biogenesisAT5G66300
GO:0048759 IEAPLAZA Integrative Orthologyxylem vessel member cell differentiationAT5G66300
GO:1990110 IEAPLAZA Integrative Orthologycallus formationAT2G18060

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0003677 IEAInterProDNA binding
GO:0005515 IEAPLAZA Integrative Orthologyprotein bindingAT5G66300
GO:0044212 IEAPLAZA Integrative Orthologytranscription regulatory region DNA bindingAT2G18060
GO:0043565 IEAPLAZA Integrative Orthologysequence-specific DNA bindingAT2G18060

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
Show redundant parents:  
 
InterPro Description
IPR003441NAC domain

Mapman id Description
15.5.17.RNA biosynthesis.transcriptional regulation.transcription factor (NAC)
No SignalP domains detected for this gene.