Gene: Spipo16G0053000 (Spirodela polyrhiza)

Overview top

Gene Identifier
Spipo16G0053000
Transcript Identifier
Spipo16G0053000
Gene Type
Coding gene
Location
pseudo16 : 3473504-3476750 : positive

Family

Gene family
HOM04M001251
(116 genes in 29 species)
specific family
Subfamily
ORTHO04M003114
(59 genes in 29 species)
specific family

Descriptions

Description
Malate dehydrogenase

Identifiers

Type Value
idSpipo16G0053000.v2
pacid31516304
tidSpipo16G0053000.v2.290

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006108 IEAInterPromalate metabolic process
GO:0055114 IEAInterProoxidation-reduction process
GO:0019752 IEAInterProcarboxylic acid metabolic process
GO:0005975 IEAInterProcarbohydrate metabolic process
GO:0009735 IEAPLAZA Integrative Orthologyresponse to cytokininAT1G04410
GO:0046686 IEAPLAZA Integrative Orthologyresponse to cadmium ionAT1G04410
GO:0009651 IEAPLAZA Integrative Orthologyresponse to salt stressAT1G04410
GO:0010043 IEAPLAZA Integrative Orthologyresponse to zinc ionAT1G04410

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0030060 IEAInterProL-malate dehydrogenase activity
GO:0016615 IEAInterPromalate dehydrogenase activity
GO:0016491 IEAInterProoxidoreductase activity
GO:0016616 IEAInterProoxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor
GO:0003824 IEAInterProcatalytic activity
GO:0005515 IEAPLAZA Integrative Orthologyprotein bindingAT5G43330

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005829 IEAPLAZA Integrative OrthologycytosolAT5G43330
GO:0016020 IEAPLAZA Integrative OrthologymembraneAT5G56720
GO:0048046 IEAPLAZA Integrative OrthologyapoplastAT5G43330
GO:0009506 IEAPLAZA Integrative OrthologyplasmodesmaAT5G43330
GO:0009507 IEAPLAZA Integrative OrthologychloroplastAT1G04410
GO:0005634 IEAPLAZA Integrative OrthologynucleusAT1G04410
GO:0005886 IEAPLAZA Integrative Orthologyplasma membraneAT5G43330
GO:0005773 IEAPLAZA Integrative OrthologyvacuoleAT1G04410
GO:0005774 IEAPLAZA Integrative Orthologyvacuolar membraneAT1G04410
GO:0009570 IEAPLAZA Integrative Orthologychloroplast stromaAT1G04410

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR011274Malate dehydrogenase, NAD-dependent, cytosolic
IPR010945Malate dehydrogenase, type 2
IPR001236Lactate/malate dehydrogenase, N-terminal
IPR022383Lactate/malate dehydrogenase, C-terminal
IPR001557L-lactate/malate dehydrogenase
IPR001252Malate dehydrogenase, active site
IPR015955Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal
IPR016040NAD(P)-binding domain

Mapman id Description
1.4.2Photosynthesis.CAM/C4 photosynthesis.NAD-dependent malate dehydrogenase
5.1.1.3.Lipid metabolism.fatty acid biosynthesis.citrate shuttle.cytosolic NAD-dependent malate dehydrogenase
No SignalP domains detected for this gene.