Gene: Spipo16G0046800 (Spirodela polyrhiza)

Overview top

Gene Identifier
Spipo16G0046800
Transcript Identifier
Spipo16G0046800
Gene Type
Coding gene
Location
pseudo16 : 3129866-3132652 : positive

Family

Gene family
HOM04M001719
(88 genes in 27 species)
specific family

Descriptions

Description
Histone-lysine N-methyltransferase, H3 lysine-9 specific 5

Identifiers

Type Value
idSpipo16G0046800.v2
pacid31516425
tidSpipo16G0046800.v2.290

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0034968 IEAInterProhistone lysine methylation
GO:0080188 IEAPLAZA Integrative OrthologyRNA-directed DNA methylationAT5G43990

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0005515 IEAInterProprotein binding
GO:0008270 IEAInterProzinc ion binding
GO:0018024 IEAInterProhistone-lysine N-methyltransferase activity
GO:0042802 IEAPLAZA Integrative Orthologyidentical protein bindingAT1G04050

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005634 IEAInterPronucleus
GO:0005730 IEAPLAZA Integrative OrthologynucleolusAT5G43990
GO:0005694 IEAPLAZA Integrative OrthologychromosomeAT5G43990
GO:0009506 IEAPLAZA Integrative OrthologyplasmodesmaAT3G04380
GO:0009507 IEAPLAZA Integrative OrthologychloroplastAT5G43990

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
Show redundant parents:  
 
InterPro Description
IPR001214SET domain
IPR007728Pre-SET domain
IPR025776Histone-lysine N-methyltransferase SUVR4/SUVR1/SUVR2

Mapman id Description
12.3.3.7.Chromatin organisation.histone modifications.histone lysine methylation.class-V histone methyltransferase (Suvar)
No SignalP domains detected for this gene.