Gene: Solyc12g094620.1 (Solanum lycopersicum)

Overview top

Gene Identifier
Solyc12g094620.1
Transcript Identifier
Solyc12g094620.1.1
Gene Type
Coding gene
Location
SL2.50ch12 : 64801796-64803844 : positive

Family

Gene family
HOM04M001293
(112 genes in 28 species)
specific family
Subfamily
ORTHO04M002046
(79 genes in 28 species)
specific family
Duplication type
Block duplicate

Descriptions

Description
Catalase (AHRD V1 ***- Q2PYW5_SOLTU); contains Interpro domain(s) IPR018028 Catalase related subgroup

Identifiers

Type Value
idSolyc12g094620.1.ITAG2.4
pacid36146821
tidSolyc12g094620.1.1.ITAG2.4
tidSolyc12g094620.1.1

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0009414 IDAGene Ontologyresponse to water deprivation1
GO:0055114 IEAInterProoxidation-reduction process
GO:0006979 IEAInterProresponse to oxidative stress
GO:0009970 IEAPLAZA Integrative Orthologycellular response to sulfate starvationAT1G20620
GO:0046686 IEAPLAZA Integrative Orthologyresponse to cadmium ionAT1G20620
GO:0009416 IEAPLAZA Integrative Orthologyresponse to light stimulusAT1G20620
GO:0006995 IEAPLAZA Integrative Orthologycellular response to nitrogen starvationAT1G20620
GO:0042744 IEAPLAZA Integrative Orthologyhydrogen peroxide catabolic processAT1G20620
GO:0009409 IEAPLAZA Integrative Orthologyresponse to coldAT1G20620
GO:0016036 IEAPLAZA Integrative Orthologycellular response to phosphate starvationAT1G20620

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0004096 IEAInterProcatalase activity
GO:0020037 IEAInterProheme binding
GO:0005515 IEAPLAZA Integrative Orthologyprotein bindingAT1G20620
GO:0003729 IEAPLAZA Integrative OrthologymRNA bindingAT1G20620
GO:0050897 IEAPLAZA Integrative Orthologycobalt ion bindingAT1G20620

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0009570 IEAPLAZA Integrative Orthologychloroplast stromaAT1G20620
GO:0022626 IEAPLAZA Integrative Orthologycytosolic ribosomeAT1G20620
GO:0009941 IEAPLAZA Integrative Orthologychloroplast envelopeAT1G20620
GO:0005773 IEAPLAZA Integrative OrthologyvacuoleAT1G20620
GO:0005886 IEAPLAZA Integrative Orthologyplasma membraneAT1G20620
GO:0005777 IEAPLAZA Integrative OrthologyperoxisomeAT1G20620
GO:0009507 IEAPLAZA Integrative OrthologychloroplastAT1G20620
GO:0009506 IEAPLAZA Integrative OrthologyplasmodesmaAT1G20620
GO:0048046 IEAPLAZA Integrative OrthologyapoplastAT1G20620
GO:0005739 IEAPLAZA Integrative OrthologymitochondrionAT1G20620
GO:0005618 IEAPLAZA Integrative Orthologycell wallAT1G20620
GO:0016020 IEAPLAZA Integrative OrthologymembraneAT1G20620

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
Show redundant parents:  
 
InterPro Description
IPR011614Catalase core domain
IPR018028Catalase, mono-functional, haem-containing
IPR010582Catalase immune-responsive domain
IPR024711Catalase, mono-functional, haem-containing, clades 1 and 3
IPR002226Catalase haem-binding site
IPR024708Catalase active site
IPR020835Catalase-like domain

Mapman id Description
10.2.1.Redox homeostasis.enzymatic reactive oxygen species scavengers.catalase
No SignalP domains detected for this gene.