Gene: Solyc12g009030.1 (Solanum lycopersicum)

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Gene Identifier
Solyc12g009030.1
Transcript Identifier
Solyc12g009030.1.1
Gene Type
Coding gene
Location
SL2.50ch12 : 2329781-2333073 : positive

Family

Gene family
HOM04M004469
(41 genes in 29 species)
specific family

Descriptions

Description
WD repeat-containing protein 61 (AHRD V1 **-- B5XGQ3_SALSA); contains Interpro domain(s) IPR020472 G-protein beta WD-40 repeat, region

Identifiers

Type Value
idSolyc12g009030.1.ITAG2.4
pacid36148312
tidSolyc12g009030.1.1.ITAG2.4
tidSolyc12g009030.1.1

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0051568 IEAPLAZA Integrative Orthologyhistone H3-K4 methylationAT4G29830
GO:0009910 IEAPLAZA Integrative Orthologynegative regulation of flower developmentAT4G29830
GO:0010452 IEAPLAZA Integrative Orthologyhistone H3-K36 methylationAT4G29830
GO:0016441 IEAPLAZA Integrative Orthologyposttranscriptional gene silencingAT4G29830
GO:1904278 IEAPLAZA Integrative Orthologypositive regulation of wax biosynthetic processAT4G29830

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0005515 IEAInterProprotein binding

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0080008 IEAPLAZA Integrative OrthologyCul4-RING E3 ubiquitin ligase complexAT4G29830
GO:0005829 IEAPLAZA Integrative OrthologycytosolAT4G29830
GO:0016593 IEAPLAZA Integrative OrthologyCdc73/Paf1 complexAT4G29830
GO:0005634 IEAPLAZA Integrative OrthologynucleusAT4G29830

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR015943WD40/YVTN repeat-like-containing domain
IPR001680WD40 repeat
IPR020472G-protein beta WD-40 repeat
IPR019775WD40 repeat, conserved site
IPR017986WD40-repeat-containing domain

Mapman id Description
15.3.6.1.6.RNA biosynthesis.RNA polymerase II-dependent transcription.transcription elongation.PAF1C transcription initiation and elongation complex.component VIP3
16.8.1.2.6.3.RNA processing.RNA surveillance.exosome complex.associated co-factor activities.SUPERKILLER (SKI) regulation complex.component SKI8
No SignalP domains detected for this gene.