Gene: Solyc12g009020.1 (Solanum lycopersicum)

Overview top

Gene Identifier
Solyc12g009020.1
Transcript Identifier
Solyc12g009020.1.1
Gene Type
Coding gene
Location
SL2.50ch12 : 2321616-2325502 : negative

Family

Gene family
HOM04M000045
(1430 genes in 29 species)
specific family
Subfamily
ORTHO04M002341
(72 genes in 29 species)
specific family

Descriptions

Description
Protein kinase (AHRD V1 **** C4Q4E0_SCHMA); contains Interpro domain(s) IPR002290 Serine/threonine protein kinase

Identifiers

Type Value
idSolyc12g009020.1.ITAG2.4
pacid36147842
tidSolyc12g009020.1.1.ITAG2.4
tidSolyc12g009020.1.1

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0000165 IDAGene OntologyMAPK cascade1
GO:0006468 IEAInterProprotein phosphorylation
GO:0009814 IEAPLAZA Integrative Orthologydefense response, incompatible interactionAT4G26070
GO:0002237 IEAPLAZA Integrative Orthologyresponse to molecule of bacterial originAT4G26070
GO:0009409 IEAPLAZA Integrative Orthologyresponse to coldAT4G29810
GO:0060918 IEAPLAZA Integrative Orthologyauxin transportAT4G29810
GO:0009414 IEAPLAZA Integrative Orthologyresponse to water deprivationAT4G26070
GO:0042742 IEAPLAZA Integrative Orthologydefense response to bacteriumAT4G26070
GO:0042542 IEAPLAZA Integrative Orthologyresponse to hydrogen peroxideAT4G26070
GO:0009631 IEAPLAZA Integrative Orthologycold acclimationAT4G29810
GO:0009611 IEAPLAZA Integrative Orthologyresponse to woundingAT4G26070
GO:0010051 IEAPLAZA Integrative Orthologyxylem and phloem pattern formationAT4G29810
GO:0009651 IEAPLAZA Integrative Orthologyresponse to salt stressAT4G29810

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0004708 IDAGene OntologyMAP kinase kinase activitySGN_ref:861
GO:0004672 IEAInterProprotein kinase activity
GO:0005524 IEAInterProATP binding
GO:0005515 IEAPLAZA Integrative Orthologyprotein bindingAT4G26070

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005737 IEAPLAZA Integrative OrthologycytoplasmAT4G29810
GO:0005886 IEAPLAZA Integrative Orthologyplasma membraneAT4G29810

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR000719Protein kinase domain
IPR001245Serine-threonine/tyrosine-protein kinase, catalytic domain
IPR017441Protein kinase, ATP binding site
IPR008271Serine/threonine-protein kinase, active site
IPR011009Protein kinase-like domain

Mapman id Description
13.4.4.1.3.Cell cycle organisation.cytokinesis.phragmoplast disassembly.NACK-PQR signalling pathway.MAPK-kinase (NQK/ANQ)
18.4.2.1.Protein modification.phosphorylation.STE protein kinase superfamily.protein kinase (MAPKK)
No SignalP domains detected for this gene.