Gene: Solyc11g072340.1 (Solanum lycopersicum)

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Gene Identifier
Solyc11g072340.1
Transcript Identifier
Solyc11g072340.1.1
Gene Type
Coding gene
Location
SL2.50ch11 : 55549837-55552648 : positive

Family

Gene family
HOM04M001025
(135 genes in 29 species)
specific family
Subfamily
ORTHO04M001689
(88 genes in 28 species)
specific family

Descriptions

Description
Arginine/serine-rich splicing factor (AHRD V1 **-- D8L816_9POAL); contains Interpro domain(s) IPR000504 RNA recognition motif, RNP-1

Identifiers

Type Value
idSolyc11g072340.1.ITAG2.4
pacid36152170
tidSolyc11g072340.1.1.ITAG2.4
tidSolyc11g072340.1.1

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0031053 IEAPLAZA Integrative Orthologyprimary miRNA processingAT5G52040

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0003676 IEAInterPronucleic acid binding
GO:0003729 IEAPLAZA Integrative OrthologymRNA bindingAT5G52040
GO:0005515 IEAPLAZA Integrative Orthologyprotein bindingAT5G52040

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0010445 IEAPLAZA Integrative Orthologynuclear dicing bodyAT5G52040
GO:0016607 IEAPLAZA Integrative Orthologynuclear speckAT4G25500

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
Show redundant parents:  
 
InterPro Description
IPR000504RNA recognition motif domain

Mapman id Description
16.4.6.3.RNA processing.pre-mRNA splicing.spliceosome-associated non-snRNP factor activities.splicing factor (RS31|40|41)
No SignalP domains detected for this gene.