Gene: Solyc11g010100.1 (Solanum lycopersicum)

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Gene Identifier
Solyc11g010100.1
Transcript Identifier
Solyc11g010100.1.1
Gene Type
Coding gene
Location
SL2.50ch11 : 3222459-3224358 : positive

Family

Gene family
HOM04M000036
(1581 genes in 29 species)
specific family
Subfamily
ORTHO04M001801
(84 genes in 27 species)
specific family
Duplication type
Block duplicate

Descriptions

Description
Ras-related protein Rab-25 (AHRD V1 ***- RAB25_BOVIN); contains Interpro domain(s) IPR015595 Rab11-related

Identifiers

Type Value
idSolyc11g010100.1.ITAG2.4
pacid36153173
tidSolyc11g010100.1.1.ITAG2.4
tidSolyc11g010100.1.1

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0042546 IEAPLAZA Integrative Orthologycell wall biogenesisAT4G39990
GO:0032456 IEAPLAZA Integrative Orthologyendocytic recyclingAT4G39990

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0003924 IEAInterProGTPase activity
GO:0005525 IEAInterProGTP binding
GO:0019900 IEAPLAZA Integrative Orthologykinase bindingAT4G39990

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0032588 IEAPLAZA Integrative Orthologytrans-Golgi network membraneAT4G39990
GO:0005886 IEAPLAZA Integrative Orthologyplasma membraneAT4G39990
GO:0016020 IEAPLAZA Integrative OrthologymembraneAT5G65270
GO:0035619 IEAPLAZA Integrative Orthologyroot hair tipAT4G39990
GO:0031901 IEAPLAZA Integrative Orthologyearly endosome membraneAT4G39990

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
Show redundant parents:  
 
InterPro Description
IPR001806Small GTPase superfamily
IPR027417P-loop containing nucleoside triphosphate hydrolase
IPR005225Small GTP-binding protein domain

Mapman id Description
22.8.1.1.Vesicle trafficking.regulation of membrane tethering and fusion.RAB-GTPase activities.A-class RAB GTPase
No SignalP domains detected for this gene.