Gene: Solyc10g081320.1 (Solanum lycopersicum)

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Gene Identifier
Solyc10g081320.1
Transcript Identifier
Solyc10g081320.1.1
Gene Type
Coding gene
Location
SL2.50ch10 : 62422767-62424965 : positive

Family

Gene family
HOM04M000112
(760 genes in 29 species)
specific family

Descriptions

Description
MYB transcription factor (AHRD V1 *--* Q9C5P9_ARATH); contains Interpro domain(s) IPR015495 Myb transcription factor

Identifiers

Type Value
idSolyc10g081320.1.ITAG2.4
pacid36156360
tidSolyc10g081320.1.1.ITAG2.4
tidSolyc10g081320.1.1

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0080060 IEAPLAZA Integrative Orthologyintegument developmentAT5G17800
GO:1902074 IEAPLAZA Integrative Orthologyresponse to saltAT1G17950
GO:1904961 IEAPLAZA Integrative Orthologyquiescent center organizationAT5G17800
GO:0006355 IEAPLAZA Integrative Orthologyregulation of transcription, DNA-templatedAT5G17800
GO:0080113 IEAPLAZA Integrative Orthologyregulation of seed growthAT5G17800
GO:0048579 IEAPLAZA Integrative Orthologynegative regulation of long-day photoperiodism, floweringAT5G17800
GO:1901347 IEAPLAZA Integrative Orthologynegative regulation of secondary cell wall biogenesisAT1G17950
GO:0009834 IEAPLAZA Integrative Orthologyplant-type secondary cell wall biogenesisAT1G17950
GO:1901348 IEAPLAZA Integrative Orthologypositive regulation of secondary cell wall biogenesisAT1G17950
GO:0009414 IEAPLAZA Integrative Orthologyresponse to water deprivationAT1G17950
GO:0009737 IEAPLAZA Integrative Orthologyresponse to abscisic acidAT1G17950
GO:0045893 IEAPLAZA Integrative Orthologypositive regulation of transcription, DNA-templatedAT5G17800
GO:0051782 IEAPLAZA Integrative Orthologynegative regulation of cell divisionAT5G17800
GO:0001935 IEAPLAZA Integrative Orthologyendothelial cell proliferationAT5G17800
GO:0071367 IEAPLAZA Integrative Orthologycellular response to brassinosteroid stimulusAT5G17800
GO:2000652 IEAPLAZA Integrative Orthologyregulation of secondary cell wall biogenesisAT1G73410

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0003677 IEAInterProDNA binding
GO:0042803 IEAPLAZA Integrative Orthologyprotein homodimerization activityAT5G17800
GO:0044212 IEAPLAZA Integrative Orthologytranscription regulatory region DNA bindingAT1G73410
GO:0043565 IEAPLAZA Integrative Orthologysequence-specific DNA bindingAT5G17800
GO:0001046 IEAPLAZA Integrative Orthologycore promoter sequence-specific DNA bindingAT5G17800
GO:0003700 IEAPLAZA Integrative Orthologytranscription factor activity, sequence-specific DNA bindingAT5G17800
GO:0005515 IEAPLAZA Integrative Orthologyprotein bindingAT5G17800

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005634 IEAPLAZA Integrative OrthologynucleusAT1G73410
GO:0005829 IEAPLAZA Integrative OrthologycytosolAT5G17800

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
Show redundant parents:  
 
InterPro Description
IPR001005SANT/Myb domain
IPR017930Myb domain
IPR009057Homeobox domain-like

Mapman id Description
15.5.2.1.RNA biosynthesis.transcriptional regulation.MYB transcription factor superfamily.transcription factor (MYB)
No SignalP domains detected for this gene.