Gene: Solyc10g045190.1 (Solanum lycopersicum)

Overview top

Gene Identifier
Solyc10g045190.1
Transcript Identifier
Solyc10g045190.1.1
Gene Type
Coding gene
Location
SL2.50ch10 : 32124326-32124685 : negative

Family

Gene family
HOM04M003481
(49 genes in 28 species)
specific family
Subfamily
ORTHO04M009921
(20 genes in 15 species)
specific family

Descriptions

Description
Protein RDM1 (AHRD V1 ***- RDM1_ARATH); contains Interpro domain(s) IPR015270 Protein of unknown function DUF1950

Identifiers

Type Value
idSolyc10g045190.1.ITAG2.4
pacid36155890
tidSolyc10g045190.1.1.ITAG2.4
tidSolyc10g045190.1.1

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0044030 IEAInterProregulation of DNA methylation
GO:0006306 IEAPLAZA Integrative OrthologyDNA methylationAT3G22680
GO:0070918 IEAPLAZA Integrative Orthologyproduction of small RNA involved in gene silencing by RNAAT3G22680

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0005515 IEAPLAZA Integrative Orthologyprotein bindingAT3G22680
GO:0043621 IEAPLAZA Integrative Orthologyprotein self-associationAT3G22680

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005634 IEAInterPronucleus
GO:0000419 IEAPLAZA Integrative OrthologyDNA-directed RNA polymerase V complexAT3G22680

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
Show redundant parents:  
 
InterPro Description
IPR015270Protein RDM1

Mapman id Description
12.5.1.14.3.Chromatin organisation.DNA methylation.RNA-directed DNA methylation (RdDM) pathway.DNA methylation accessory complex (DDR).component RDM1
No SignalP domains detected for this gene.