Gene: Solyc10g024470.1 (Solanum lycopersicum)

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Gene Identifier
Solyc10g024470.1
Transcript Identifier
Solyc10g024470.1.1
Gene Type
Coding gene
Location
SL2.50ch10 : 14327382-14331721 : positive

Family

Gene family
HOM04M006110
(34 genes in 25 species)
specific family

Descriptions

Description
Chromobox homolog 7 (AHRD V1 *--- B0QYP2_HUMAN); contains Interpro domain(s) IPR000953 Chromo domain

Identifiers

Type Value
idSolyc10g024470.1.ITAG2.4
pacid36155001
tidSolyc10g024470.1.1.ITAG2.4
tidSolyc10g024470.1.1

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0010048 IEAPLAZA Integrative Orthologyvernalization responseAT5G17690
GO:0010016 IEAPLAZA Integrative Orthologyshoot system morphogenesisAT5G17690
GO:0045892 IEAPLAZA Integrative Orthologynegative regulation of transcription, DNA-templatedAT5G17690
GO:0009825 IEAPLAZA Integrative Orthologymultidimensional cell growthAT5G17690
GO:0048573 IEAPLAZA Integrative Orthologyphotoperiodism, floweringAT5G17690
GO:0048364 IEAPLAZA Integrative Orthologyroot developmentAT5G17690
GO:0009910 IEAPLAZA Integrative Orthologynegative regulation of flower developmentAT5G17690
GO:0045857 IEAPLAZA Integrative Orthologynegative regulation of molecular function, epigeneticAT5G17690
GO:0009648 IEAPLAZA Integrative OrthologyphotoperiodismAT5G17690
GO:0006325 IEAPLAZA Integrative Orthologychromatin organizationAT5G17690
GO:0006342 IEAPLAZA Integrative Orthologychromatin silencingAT5G17690
GO:0045814 IEAPLAZA Integrative Orthologynegative regulation of gene expression, epigeneticAT5G17690

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0003935 IEAPLAZA Integrative OrthologyGTP cyclohydrolase II activityAT5G17690
GO:0005515 IEAPLAZA Integrative Orthologyprotein bindingAT5G17690
GO:0003677 IEAPLAZA Integrative OrthologyDNA bindingAT5G17690
GO:0003682 IEAPLAZA Integrative Orthologychromatin bindingAT5G17690
GO:0043565 IEAPLAZA Integrative Orthologysequence-specific DNA bindingAT5G17690
GO:0008686 IEAPLAZA Integrative Orthology3,4-dihydroxy-2-butanone-4-phosphate synthase activityAT5G17690
GO:0035064 IEAPLAZA Integrative Orthologymethylated histone bindingAT5G17690

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0000791 IEAPLAZA Integrative OrthologyeuchromatinAT5G17690
GO:0009507 IEAPLAZA Integrative OrthologychloroplastAT5G17690
GO:0005634 IEAPLAZA Integrative OrthologynucleusAT5G17690
GO:0005720 IEAPLAZA Integrative Orthologynuclear heterochromatinAT5G17690

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR023780Chromo domain
IPR023779Chromo domain, conserved site
IPR000953Chromo/chromo shadow domain
IPR016197Chromo domain-like

Mapman id Description
12.3.5.1.2.Chromatin organisation.histone modifications.histone ubiquitination.PRC1 histone mono-ubiquitination complex.modification reader component Pc/LHP1
No SignalP domains detected for this gene.