PLAZA 4.0 Monocots gene overview : Solyc10g005770.2

Gene: Solyc10g005770.2 (Solanum lycopersicum)

Overview

Gene Identifier: Solyc10g005770.2
Transcript Identifier: Solyc10g005770.2.1
Gene Type: Coding gene
Location: SL2.50ch10 : 616758-619483 : negative

Family

Gene family: HOM04M000078
(1048 genes in 29 species)
specific family
Subfamily: ORTHO04M000137
(420 genes in 27 species)
specific family
Duplication type: Block duplicate

Descriptions

Description: Ribosomal protein S6 kinase alpha-3 (AHRD V1 *-** KS6A3_HUMAN); contains Interpro domain(s) IPR002290 Serine/threonine protein kinase

Identifiers

Type	Value
id	Solyc10g005770.2.ITAG2.4
pacid	36155495
tid	Solyc10g005770.2.1.ITAG2.4
tid	Solyc10g005770.2.1

Toolbox

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View

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...the multiple sequence alignment of the gene family with BioJS
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...BLAST hits against NCBIs protein database.
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Browse

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Biological Process

GO term	Evidence(s)	Provider	Description	Source
GO:0006468	IEA	InterPro	protein phosphorylation
GO:2000114	IEA	PLAZA Integrative Orthology	regulation of establishment of cell polarity	AT5G55910
GO:0010540	IEA	PLAZA Integrative Orthology	basipetal auxin transport	AT4G26610
GO:0048766	IEA	PLAZA Integrative Orthology	root hair initiation	AT5G55910

Molecular Function

GO term	Evidence(s)	Provider	Description	Source
GO:0004672	IEA	InterPro	protein kinase activity
GO:0005524	IEA	InterPro	ATP binding
GO:1901981	IEA	PLAZA Integrative Orthology	phosphatidylinositol phosphate binding	AT5G55910
GO:0005515	IEA	PLAZA Integrative Orthology	protein binding	AT4G26610

Cellular Component

GO term	Evidence(s)	Provider	Description	Source
GO:0005730	IEA	PLAZA Integrative Orthology	nucleolus	AT5G47750
GO:0005737	IEA	PLAZA Integrative Orthology	cytoplasm	AT5G47750
GO:0009925	IEA	PLAZA Integrative Orthology	basal plasma membrane	AT5G55910
GO:0005634	IEA	PLAZA Integrative Orthology	nucleus	AT5G47750

Color Legend

Experimental Evidence

Electronic Evidence

Computational Reviewed Evidence

InterPro	Description
IPR000719	Protein kinase domain
IPR008271	Serine/threonine-protein kinase, active site
IPR011009	Protein kinase-like domain

Mapman id	Description
18.4.6.5	.Protein modification.phosphorylation.AGC protein kinase superfamily.protein kinase (AGC-VIII)

No SignalP domains detected for this gene.