Gene: Solyc10g005550.1 (Solanum lycopersicum)

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Gene Identifier
Solyc10g005550.1
Transcript Identifier
Solyc10g005550.1.1
Gene Type
Coding gene
Location
SL2.50ch10 : 455329-456290 : negative

Family

Gene family
HOM04M000010
(3187 genes in 28 species)
specific family
Duplication type
Tandem duplicate

Descriptions

Description
Myb-related transcription factor (AHRD V1 *--* A7ULI0_DATME); contains Interpro domain(s) IPR015495 Myb transcription factor

Identifiers

Type Value
idSolyc10g005550.1.ITAG2.4
pacid36155352
tidSolyc10g005550.1.1.ITAG2.4
tidSolyc10g005550.1.1

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0009753 IEAPLAZA Integrative Orthologyresponse to jasmonic acidAT1G79180
GO:0009411 IEAPLAZA Integrative Orthologyresponse to UVAT1G79180
GO:0009751 IEAPLAZA Integrative Orthologyresponse to salicylic acidAT1G79180
GO:0071281 IEAPLAZA Integrative Orthologycellular response to iron ionAT1G56160
GO:0009416 IEAPLAZA Integrative Orthologyresponse to light stimulusAT1G16490
GO:0009866 IEAPLAZA Integrative Orthologyinduced systemic resistance, ethylene mediated signaling pathwayAT1G56160
GO:0009809 IEAPLAZA Integrative Orthologylignin biosynthetic processAT1G79180
GO:0045893 IEAPLAZA Integrative Orthologypositive regulation of transcription, DNA-templatedAT1G79180
GO:0071369 IEAPLAZA Integrative Orthologycellular response to ethylene stimulusAT1G56160
GO:0071732 IEAPLAZA Integrative Orthologycellular response to nitric oxideAT1G56160
GO:2000652 IEAPLAZA Integrative Orthologyregulation of secondary cell wall biogenesisAT1G79180

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0003677 IEAInterProDNA binding
GO:0043565 IEAPLAZA Integrative Orthologysequence-specific DNA bindingAT1G16490
GO:0003700 IEAPLAZA Integrative Orthologytranscription factor activity, sequence-specific DNA bindingAT1G79180

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005634 IEAPLAZA Integrative OrthologynucleusAT1G79180

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR001005SANT/Myb domain
IPR017930Myb domain
IPR009057Homeobox domain-like

Mapman id Description
15.5.2.1.RNA biosynthesis.transcriptional regulation.MYB transcription factor superfamily.transcription factor (MYB)
No SignalP domains detected for this gene.