Gene: Solyc09g089920.1 (Solanum lycopersicum)

Overview top

Gene Identifier
Solyc09g089920.1
Transcript Identifier
Solyc09g089920.1.1
Gene Type
Coding gene
Location
SL2.50ch09 : 69522423-69522881 : negative

Family

Gene family
HOM04M000008
(3579 genes in 29 species)
specific family
Subfamily
ORTHO04M000003
(3095 genes in 29 species)
specific family
Duplication type
Tandem duplicate   and   Block duplicate

Descriptions

Description
Ethylene-responsive transcription factor 5 (AHRD V1 *-** EF102_ARATH); contains Interpro domain(s) IPR001471 Pathogenesis-related transcriptional factor and ERF, DNA-binding

Identifiers

Type Value
idSolyc09g089920.1.ITAG2.4
pacid36133055
tidSolyc09g089920.1.1.ITAG2.4
tidSolyc09g089920.1.1

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006355 IEAInterProregulation of transcription, DNA-templated
GO:0010200 IEAPLAZA Integrative Orthologyresponse to chitinAT3G23230
GO:0009873 IEAPLAZA Integrative Orthologyethylene-activated signaling pathwayAT3G23230

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0003700 IEAInterProtranscription factor activity, sequence-specific DNA binding
GO:0003677 IEAInterProDNA binding

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005622 IEAPLAZA Integrative OrthologyintracellularAT3G23230

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
Show redundant parents:  
 
InterPro Description
IPR001471AP2/ERF domain
IPR017392AP2/ERF transcription factor ERF/PTI6
IPR016177DNA-binding domain

Mapman id Description
15.5.7.1.RNA biosynthesis.transcriptional regulation.AP2/ERF transcription factor superfamily.transcription factor (ERF)
No SignalP domains detected for this gene.