Gene: Solyc09g056260.2 (Solanum lycopersicum)

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Gene Identifier
Solyc09g056260.2
Transcript Identifier
Solyc09g056260.2.1
Gene Type
Coding gene
Location
SL2.50ch09 : 48067919-48081152 : negative

Family

Gene family
HOM04M005569
(36 genes in 28 species)
specific family

Descriptions

Description
tRNA pseudouridine synthase family protein (AHRD V1 **** D7LBM5_ARALY); contains Interpro domain(s) IPR001406 Pseudouridine synthase I, TruA

Identifiers

Type Value
idSolyc09g056260.2.ITAG2.4
pacid36132922
tidSolyc09g056260.2.1.ITAG2.4
tidSolyc09g056260.2.1

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0001522 IEAInterPropseudouridine synthesis
GO:0009451 IEAInterProRNA modification

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0003723 IEAInterProRNA binding
GO:0009982 IEAInterPropseudouridine synthase activity

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
Show redundant parents:  
 
InterPro Description
IPR020095Pseudouridine synthase I, TruA, C-terminal
IPR001406Pseudouridine synthase I, TruA
IPR020097Pseudouridine synthase I, TruA, alpha/beta domain
IPR020103Pseudouridine synthase, catalytic domain

Mapman id Description
16.6.3.1.RNA processing.tRNA modification.pseudouridylation.tRNA pseudouridine synthase (TruA)
No SignalP domains detected for this gene.