Gene: Solyc08g083130.2 (Solanum lycopersicum)

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Gene Identifier
Solyc08g083130.2
Transcript Identifier
Solyc08g083130.2.1
Gene Type
Coding gene
Location
SL2.50ch08 : 65677370-65678165 : negative

Family

Gene family
HOM04M000108
(781 genes in 27 species)
specific family
Subfamily
ORTHO04M000131
(431 genes in 27 species)
specific family
Duplication type
Block duplicate

Descriptions

Description
Homeobox leucine zipper protein (AHRD V1 *-*- B8YIB0_MIRJA); contains Interpro domain(s) IPR001356 Homeobox

Identifiers

Type Value
idSolyc08g083130.2.ITAG2.4
pacid36149621
tidSolyc08g083130.2.1.ITAG2.4
tidSolyc08g083130.2.1

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006355 IEAInterProregulation of transcription, DNA-templated
GO:0009414 IEAPLAZA Integrative Orthologyresponse to water deprivationAT3G61890
GO:0009615 IEAPLAZA Integrative Orthologyresponse to virusAT3G61890
GO:0006970 IEAPLAZA Integrative Orthologyresponse to osmotic stressAT3G61890
GO:0045893 IEAPLAZA Integrative Orthologypositive regulation of transcription, DNA-templatedAT3G61890
GO:0009651 IEAPLAZA Integrative Orthologyresponse to salt stressAT3G61890
GO:0009737 IEAPLAZA Integrative Orthologyresponse to abscisic acidAT3G61890
GO:0009738 IEAPLAZA Integrative Orthologyabscisic acid-activated signaling pathwayAT2G46680

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0003677 IEAInterProDNA binding
GO:0003700 IEAInterProtranscription factor activity, sequence-specific DNA binding
GO:0043565 IEAInterProsequence-specific DNA binding
GO:0005515 IEAPLAZA Integrative Orthologyprotein bindingAT3G61890

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005634 IEAPLAZA Integrative OrthologynucleusAT3G61890

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR027910YdiL-like domain
IPR001356Homeobox domain
IPR003106Leucine zipper, homeobox-associated
IPR000047Helix-turn-helix motif
IPR017970Homeobox, conserved site
IPR009057Homeobox domain-like

Mapman id Description
15.5.3.1.RNA biosynthesis.transcriptional regulation.Homeobox transcription factor superfamily.transcription factor (HD-ZIP I/II)
No SignalP domains detected for this gene.