Gene: Solyc08g081620.2 (Solanum lycopersicum)
Overview 
- Gene Identifier
- Solyc08g081620.2
- Transcript Identifier
- Solyc08g081620.2.1
- Gene Type
- Coding gene
- Location
- SL2.50ch08 : 64612142-64615406 : negative
Family
- Gene family
- Subfamily
Descriptions
- Description
-
Endoglucanase 1 (AHRD V1 ***- B6U0P7_MAIZE); contains Interpro domain(s) IPR008928 Six-hairpin glycosidase-like IPR012341 Six-hairpin glycosidase IPR018221 Glycoside hydrolase, family 9, active site IPR001701 Glycoside hydrolase, family 9
Identifiers
Type | Value |
---|---|
id | Solyc08g081620.2.ITAG2.4 |
pacid | 36150057 |
tid | Solyc08g081620.2.1.ITAG2.4 |
tid | Solyc08g081620.2.1 |
Toolbox
Explore
- ...the colinearity of this gene with other genomes.
- ...the local gene organization for homologous genes.
- ...the phylogenetic tree of the homologous gene family.
- ...the orthologs using the Integrative Orthology Viewer.
- ...the conserved binding sites (upstream/downstream,intron)
Create
View
- ...sequences.
- ...the multiple sequence alignment of the gene family with BioJS
- ...BLAST hits against the PLAZA database.
- ...BLAST hits against NCBIs protein database.
- ...all colinear gene pairs.