Gene: Solyc08g079270.2 (Solanum lycopersicum)

Overview top

Gene Identifier
Solyc08g079270.2
Transcript Identifier
Solyc08g079270.2.1
Gene Type
Coding gene
Location
SL2.50ch08 : 62879571-62881462 : positive

Family

Gene family
HOM04M000010
(3187 genes in 28 species)
specific family

Descriptions

Description
MYB transcription factor (AHRD V1 ***- Q6R075_ARATH); contains Interpro domain(s) IPR015495 Myb transcription factor

Identifiers

Type Value
idSolyc08g079270.2.ITAG2.4
pacid36150666
tidSolyc08g079270.2.1.ITAG2.4
tidSolyc08g079270.2.1

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:2000652 IEAPLAZA Integrative Orthologyregulation of secondary cell wall biogenesisAT4G22680
GO:0006355 IEAPLAZA Integrative Orthologyregulation of transcription, DNA-templatedAT4G12350
GO:0045893 IEAPLAZA Integrative Orthologypositive regulation of transcription, DNA-templatedAT4G22680

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0003677 IEAInterProDNA binding
GO:0044212 IEAPLAZA Integrative Orthologytranscription regulatory region DNA bindingAT4G12350

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005634 IEAPLAZA Integrative OrthologynucleusAT4G22680

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
Show redundant parents:  
 
InterPro Description
IPR001005SANT/Myb domain
IPR017930Myb domain
IPR009057Homeobox domain-like

Mapman id Description
15.5.2.1.RNA biosynthesis.transcriptional regulation.MYB transcription factor superfamily.transcription factor (MYB)
No SignalP domains detected for this gene.