Gene: Solyc08g062520.2 (Solanum lycopersicum)

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Gene Identifier
Solyc08g062520.2
Transcript Identifier
Solyc08g062520.2.1
Gene Type
Coding gene
Location
SL2.50ch08 : 51196496-51203440 : negative

Family

Gene family
HOM04M000194
(476 genes in 27 species)
specific family
Subfamily
ORTHO04M000128
(433 genes in 27 species)
specific family
Duplication type
Tandem duplicate

Descriptions

Description
Homeodomain-containing transcription factor FWA (AHRD V1 **** B5BQ02_ARASU); contains Interpro domain(s) IPR002913 Lipid-binding START

Identifiers

Type Value
idSolyc08g062520.2.ITAG2.4
pacid36149584
tidSolyc08g062520.2.1.ITAG2.4
tidSolyc08g062520.2.1

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0090627 IEAPLAZA Tree-based Orthologyplant epidermal cell differentiationAT4G21750
GO:0031047 IEAPLAZA Tree-based Orthologygene silencing by RNAAT4G25530
GO:0048497 IEAPLAZA Tree-based Orthologymaintenance of floral organ identityAT1G05230
GO:0043481 IEAPLAZA Tree-based Orthologyanthocyanin accumulation in tissues in response to UV lightAT4G00730
GO:0009957 IEAPLAZA Tree-based Orthologyepidermal cell fate specificationAT1G79840
GO:0009913 IEAPLAZA Tree-based Orthologyepidermal cell differentiationAT4G21750
GO:0006349 IEAPLAZA Tree-based Orthologyregulation of gene expression by genetic imprintingAT4G25530
GO:0048825 IEAPLAZA Tree-based Orthologycotyledon developmentAT4G21750
GO:0009845 IEAPLAZA Tree-based Orthologyseed germinationAT4G21750
GO:0048765 IEAPLAZA Tree-based Orthologyroot hair cell differentiationAT4G00730
GO:0010090 IEAPLAZA Tree-based Orthologytrichome morphogenesisAT1G05230
GO:0010091 IEAPLAZA Tree-based Orthologytrichome branchingAT1G73360
GO:0006355 IEAPLAZA Homology (enrichment)regulation of transcription, DNA-templated
GO:0009909 IEAPLAZA Tree-based Orthologyregulation of flower developmentAT4G25530
GO:0009827 IEAPLAZA Tree-based Orthologyplant-type cell wall modificationAT4G00730
GO:0048364 IEAPLAZA Tree-based Orthologyroot developmentAT4G00730
GO:0009828 IEAPLAZA Tree-based Orthologyplant-type cell wall looseningAT1G73360
GO:0009911 IEAPLAZA Tree-based Orthologypositive regulation of flower developmentAT4G25530
GO:0042335 IEAPLAZA Tree-based Orthologycuticle developmentAT4G00730
GO:0010062 IEAPLAZA Tree-based Orthologynegative regulation of trichoblast fate specificationAT1G79840

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0008289 IEAInterProlipid binding
GO:0005515 IEAPLAZA Tree-based Orthologyprotein bindingAT4G21750
GO:0003677 IEAPLAZA Tree-based OrthologyDNA bindingAT4G04890
GO:0042803 IEAPLAZA Tree-based Orthologyprotein homodimerization activityAT4G25530
GO:0003700 IEAPLAZA Tree-based Orthologytranscription factor activity, sequence-specific DNA bindingAT1G73360
GO:0043565 IEAPLAZA Integrative Orthologysequence-specific DNA bindingAT5G17320
GO:0000976 IEAPLAZA Tree-based Orthologytranscription regulatory region sequence-specific DNA bindingAT1G73360

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005634 IEAPLAZA Tree-based OrthologynucleusAT4G21750

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR023393START-like domain
IPR002913START domain

Mapman id Description
15.5.3.3.RNA biosynthesis.transcriptional regulation.Homeobox transcription factor superfamily.transcription factor (HD-ZIP IV)
No SignalP domains detected for this gene.